RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TMEM169Q96HH4 297 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 ACSS3Q9H6R3 686 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 VRTNQ9H8Y1 702 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 MARCH2Q9P0N8 246 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 FZD10Q9ULW2 581 aa16.29■□□□□ 0.2
SMARCD1-202ENST00000394963 HTTP42858 3142 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 HSPA4LO95757 839 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 UPP1Q16831 310 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 ITPRIPL1Q6GPH6 555 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 ZNF280DQ6N043 979 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 PAQR9Q6ZVX9 377 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 STRADAQ7RTN6 431 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 GSDMBQ8TAX9 411 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 CCDC124Q96CT7 223 aaKnown RBP16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 RMDN2Q96LZ7 410 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 AGAP2Q99490 1192 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 XAB2Q9HCS7 855 aaKnown RBP16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 GDAP2Q9NXN4 497 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 GOLGA8QA0A0J9YX86 632 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 GOLGA8OA6NCC3 632 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 GOLGA8NF8WBI6 632 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 SNX3O60493 162 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 DAB1O75553 588 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 WARSP23381 471 aaKnown RBP16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 RAB27AP51159 221 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 MAPRE1Q15691 268 aaKnown RBP16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 LRRC8DQ7L1W4 858 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 CRLF3Q8IUI8 442 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 USP29Q9HBJ7 922 aa16.28■□□□□ 0.2
SMARCD1-202ENST00000394963 ACRP10323 421 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 ESRRAP11474 423 aaPredicted RBP16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 SCNN1BP51168 640 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 SPRED3Q2MJR0 410 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 TRIM68Q6AZZ1 485 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 ZMIZ2Q8NF64 920 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 CXorf38Q8TB03 319 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 SREK1Q8WXA9 508 aaKnown RBP16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 SEPT8Q92599 483 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 DNM1LO00429 736 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 SOX11P35716 441 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 PTPN9P43378 593 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 GABRB2P47870 512 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 TWF1Q12792 350 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 ACCSLQ4AC99 568 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 DCLRE1AQ6PJP8 1040 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 MYLK4Q86YV6 388 aaPredicted RBP16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 GSTCDQ8NEC7 633 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 CKAP2Q8WWK9 683 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 ATXN2LQ8WWM7 1075 aaKnown RBP16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 GPR62Q9BZJ7 368 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 MUC3BQ9H195 1237 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 HIPK3Q9H422 1215 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 CD248Q9HCU0 757 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 FBXO6Q9NRD1 293 aaPredicted RBP16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 IPO11Q9UI26 975 aaKnown RBP16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 TLL2Q9Y6L7 1015 aa16.27■□□□□ 0.2
SMARCD1-202ENST00000394963 FAM237BA0A1B0GVD1 139 aa16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 MYL2P10916 166 aa16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 PLD1Q13393 1074 aa16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 DPYSL2Q16555 572 aa16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 N4BP2L1Q5TBK1 243 aaPredicted RBP16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 PACS2Q86VP3 889 aa16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 ZNF296Q8WUU4 475 aaPredicted RBP16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 SKA2Q8WVK7 121 aaPredicted RBP16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 E2F7Q96AV8 911 aa16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 MAGEB18Q96M61 343 aa16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 UNC93B1Q9H1C4 597 aa16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 SUDS3Q9H7L9 328 aaPredicted RBP16.27■□□□□ 0.19
SMARCD1-202ENST00000394963 TPP1O14773 563 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 CFLARO15519 480 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 LYPLA1O75608 230 aaPredicted RBP16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 BAG2O95816 211 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 CCNB1P14635 433 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 RPL9P32969 192 aaKnown RBP16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 SERPINB4P48594 390 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 PGFP49763 221 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 ARHGEF6Q15052 776 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 SPATS2Q86XZ4 545 aaKnown RBP16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 OR6K2Q8NGY2 324 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 ELMO2Q96JJ3 720 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 NDNQ99608 321 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 EBNA1BP2Q99848 306 aaKnown RBP16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 TXLNGYQ9BZA5 131 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 SLC24A2Q9UI40 661 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 A0A1W2PQ45 241 aaPredicted RBP16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 A0A1W2PQY0 241 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 HAS3O00219 553 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 GSTA1P08263 222 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 GSTA2P09210 222 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 CSE1LP55060 971 aaKnown RBP16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 ITGA9Q13797 1035 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 NLRP9Q7RTR0 991 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 CCDC117Q8IWD4 279 aaPredicted RBP16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 LGI2Q8N0V4 545 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 OMDQ99983 421 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 CATSPERBQ9H7T0 1116 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 SLC40A1Q9NP59 571 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 GKN1Q9NS71 199 aa16.26■□□□□ 0.19
SMARCD1-202ENST00000394963 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms