RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TIPRLO75663 272 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 CBX6O95503 412 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 STAG3L1P0CL83 205 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.47□□□□□ -0.41
SIN3A-202ENST00000394947 FBXO42Q6P3S6 717 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 OR10G6Q8NH81 332 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 SLC9A6Q92581 669 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 PPP1R2P1Q96PQ5 205 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 PHF20Q9BVI0 1012 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 ZNF70Q9UC06 446 aaPredicted RBP12.47□□□□□ -0.41
SIN3A-202ENST00000394947 IGSF9BQ9UPX0 1349 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 TFECO14948 347 aaPredicted RBP12.47□□□□□ -0.41
SIN3A-202ENST00000394947 DCXO43602 365 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 SIN3BO75182 1162 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 ERN1O75460 977 aaKnown RBP12.47□□□□□ -0.41
SIN3A-202ENST00000394947 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
SIN3A-202ENST00000394947 FAM126BQ8IXS8 530 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 ZNF366Q8N895 744 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 SPATA20Q8TB22 786 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 OSMRQ99650 979 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 APOL4Q9BPW4 351 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 CBWD1Q9BRT8 395 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 FBXO28Q9NVF7 368 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
SIN3A-202ENST00000394947 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 H7C4K7 107 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 NRG3P56975 720 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 PPP2R2BQ00005 443 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 TRAPPC11Q7Z392 1133 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 KCNMB4Q86W47 210 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 ZNF276Q8N554 614 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 C7orf57Q8NEG2 295 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 ATL1Q8WXF7 558 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 CITED4Q96RK1 184 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 TBC1D24Q9ULP9 559 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 ENTPD4Q9Y227 616 aa12.47□□□□□ -0.41
SIN3A-202ENST00000394947 TCOF1Q13428 1488 aaKnown RBP12.47□□□□□ -0.41
SIN3A-202ENST00000394947 SCN2BO60939 215 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 TMEM253P0C7T8 217 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 TPBGLP0DKB5 382 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 AMD1P17707 334 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 PPATQ06203 517 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 INSCQ1MX18 579 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 PCNX4Q63HM2 1172 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 NETO2Q8NC67 525 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 TRPV3Q8NET8 790 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 C18orf25Q96B23 403 aaPredicted RBP12.46□□□□□ -0.41
SIN3A-202ENST00000394947 BTRCQ9Y297 605 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 OR10H2O60403 315 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 SLC25A12O75746 678 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 SERPINA3P01011 423 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 CCR1P32246 355 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 RIBC1Q8N443 379 aaPredicted RBP12.46□□□□□ -0.41
SIN3A-202ENST00000394947 METTL6Q8TCB7 284 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 EPB41L4BQ9H329 900 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 NEK6Q9HC98 313 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 TCF7L2Q9NQB0 619 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 CIDEBQ9UHD4 219 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 AMPD1P23109 780 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 GRSF1Q12849 480 aaKnown RBP eCLIP12.46□□□□□ -0.41
SIN3A-202ENST00000394947 ITGB3BPQ13352 177 aaPredicted RBP12.46□□□□□ -0.41
SIN3A-202ENST00000394947 SETMARQ53H47 684 aaPredicted RBP12.46□□□□□ -0.41
SIN3A-202ENST00000394947 SNX32Q86XE0 403 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 COL23A1Q86Y22 540 aaPredicted RBP12.46□□□□□ -0.41
SIN3A-202ENST00000394947 PALB2Q86YC2 1186 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 LGI2Q8N0V4 545 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 POC5Q8NA72 575 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 ZSWIM1Q9BR11 485 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 VCPKMTQ9H867 229 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 KLQ9UEF7 1012 aa12.46□□□□□ -0.41
SIN3A-202ENST00000394947 TMEM114B3SHH9 223 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 H0Y858 1186 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 PIAS1O75925 651 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 JAK1P23458 1154 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 MYBPC2Q14324 1141 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 SLC30A10Q6XR72 485 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 KYQ8NBH2 561 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 MYCBPAPQ8TBZ2 947 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 ACOT9Q9Y305 439 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 SNUPNO95149 360 aaKnown RBP12.46□□□□□ -0.42
SIN3A-202ENST00000394947 CORO7P57737 925 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 LY6KQ17RY6 165 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 SVOPQ8N4V2 548 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 KLHL23Q8NBE8 558 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 DSN1Q9H410 356 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 ABCB9Q9NP78 766 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 SPG21Q9NZD8 308 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 DAGLAQ9Y4D2 1042 aa12.46□□□□□ -0.42
SIN3A-202ENST00000394947 MTSS1O43312 755 aa12.45□□□□□ -0.42
SIN3A-202ENST00000394947 CXCL8P10145 99 aa12.45□□□□□ -0.42
SIN3A-202ENST00000394947 SLC2A3P11169 496 aa12.45□□□□□ -0.42
SIN3A-202ENST00000394947 FUT4P22083 530 aa12.45□□□□□ -0.42
SIN3A-202ENST00000394947 AKT2P31751 481 aa12.45□□□□□ -0.42
SIN3A-202ENST00000394947 TERB1Q8NA31 727 aa12.45□□□□□ -0.42
SIN3A-202ENST00000394947 PJA1Q8NG27 643 aa12.45□□□□□ -0.42
SIN3A-202ENST00000394947 PRRG4Q9BZD6 226 aa12.45□□□□□ -0.42
SIN3A-202ENST00000394947 ING3Q9NXR8 418 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms