RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TSG101Q99816 390 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 ZSWIM1Q9BR11 485 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 MIS12Q9H081 205 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 GDF3Q9NR23 364 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 ADAMTS1Q9UHI8 967 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 SLCO3A1Q9UIG8 710 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 FZD4Q9ULV1 537 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 CEP83Q9Y592 693 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 PCDHB4Q9Y5E5 795 aa21.88■■□□□ 1.09
TRAF4-203ENST00000394925 EDDM13A0A1B0GTR0 161 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 A0A1W2PQ27 194 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 A0A1W2PQ64 194 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 A0A1W2PR77 199 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 TARSL2A2RTX5 802 aaKnown RBP21.87■■□□□ 1.09
TRAF4-203ENST00000394925 RNF225M0QZC1 329 aaPredicted RBP21.87■■□□□ 1.09
TRAF4-203ENST00000394925 KALRNO60229 2985 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 MOCS2O96007 188 aaPredicted RBP21.87■■□□□ 1.09
TRAF4-203ENST00000394925 CALCAP01258 141 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 SRPRAP08240 638 aaKnown RBP21.87■■□□□ 1.09
TRAF4-203ENST00000394925 BRD2P25440 801 aaKnown RBP21.87■■□□□ 1.09
TRAF4-203ENST00000394925 ITPKBP27987 946 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 CCR5P51681 352 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 FKBP3Q00688 224 aaKnown RBP21.87■■□□□ 1.09
TRAF4-203ENST00000394925 SEMG2Q02383 582 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 ARID5BQ14865 1188 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 CNGA2Q16280 664 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 DCAF6Q58WW2 860 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 MS4A13Q5J8X5 152 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 ANKRD40Q6AI12 368 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 AADATQ8N5Z0 425 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 OR14C36Q8NHC7 312 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 SERAC1Q96JX3 654 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 FAM129BQ96TA1 746 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 ARMCX3Q9UH62 379 aaPredicted RBP21.87■■□□□ 1.09
TRAF4-203ENST00000394925 ZDHHC9Q9Y397 364 aa21.87■■□□□ 1.09
TRAF4-203ENST00000394925 MYLKQ15746 1914 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 LUC7L3O95232 432 aaKnown RBP21.86■■□□□ 1.09
TRAF4-203ENST00000394925 MOCS3O95396 460 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 FYNP06241 537 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 C1SP09871 688 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 ACADVLP49748 655 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 ECT2LQ008S8 904 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 PNOCQ13519 176 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 RNF219Q5W0B1 726 aaPredicted RBP21.86■■□□□ 1.09
TRAF4-203ENST00000394925 SND1Q7KZF4 910 aaKnown RBP eCLIP21.86■■□□□ 1.09
TRAF4-203ENST00000394925 STK40Q8N2I9 435 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 ADAM32Q8TC27 787 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 DQX1Q8TE96 717 aaKnown RBP21.86■■□□□ 1.09
TRAF4-203ENST00000394925 SLC35C1Q96A29 364 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 RPL10LQ96L21 214 aaKnown RBP21.86■■□□□ 1.09
TRAF4-203ENST00000394925 HSFY1Q96LI6 401 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 SERPINB11Q96P15 392 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 TLR6Q9Y2C9 796 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 AK5Q9Y6K8 562 aa21.86■■□□□ 1.09
TRAF4-203ENST00000394925 ARID1BQ8NFD5 2236 aaPredicted RBP21.86■■□□□ 1.09
TRAF4-203ENST00000394925 YKT6O15498 198 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 FBXO21O94952 628 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 CDK4P11802 303 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 GOT1P17174 413 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 EPHA8P29322 1005 aaPredicted RBP21.85■■□□□ 1.09
TRAF4-203ENST00000394925 ARRB1P49407 418 aaPredicted RBP21.85■■□□□ 1.09
TRAF4-203ENST00000394925 PMS1P54277 932 aaKnown RBP21.85■■□□□ 1.09
TRAF4-203ENST00000394925 ADPRHP54922 357 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 BNIP3Q12983 259 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 TARDBPQ13148 414 aaKnown RBP eCLIP21.85■■□□□ 1.09
TRAF4-203ENST00000394925 HES3Q5TGS1 186 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 APCDD1Q8J025 514 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 KAT5Q92993 513 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 SLC39A13Q96H72 371 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 NT5C1BQ96P26 610 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 UBL7Q96S82 380 aaPredicted RBP21.85■■□□□ 1.09
TRAF4-203ENST00000394925 XPO7Q9UIA9 1087 aaKnown RBP21.85■■□□□ 1.09
TRAF4-203ENST00000394925 NAALADL1Q9UQQ1 740 aa21.85■■□□□ 1.09
TRAF4-203ENST00000394925 NYNRINQ9P2P1 1898 aaKnown RBP21.85■■□□□ 1.09
TRAF4-203ENST00000394925 ITIH6Q6UXX5 1313 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 PTPRQQ9UMZ3 2332 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3DA0A087WVF3 549 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3IA0A087WXS9 549 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3EA0A087X179 549 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3KA0A087X1G2 549 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3FA6NER0 549 aaPredicted RBP21.84■■□□□ 1.09
TRAF4-203ENST00000394925 C10orf142B7Z368 130 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3LB9A6J9 549 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TLR4O00206 839 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TLX3O43711 291 aaPredicted RBP21.84■■□□□ 1.09
TRAF4-203ENST00000394925 ADH1BP00325 375 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 IL1BP01584 269 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 PRB1P04280 392 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3HP0C7X1 549 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 C5AR1P21730 350 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 FMO5P49326 533 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 NUMBP49757 651 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 STK19P49842 368 aaPredicted RBP21.84■■□□□ 1.09
TRAF4-203ENST00000394925 NXPH1P58417 271 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 STILQ15468 1287 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 SLC45A4Q5BKX6 768 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3GQ6DHY5 549 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3CQ6IPX1 549 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 LRRC69Q6ZNQ3 347 aa21.84■■□□□ 1.09
TRAF4-203ENST00000394925 TBC1D3Q8IZP1 549 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms