RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CYP4F11Q9HBI6 524 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 ZNF358Q9NW07 568 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 ERAP1Q9NZ08 941 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 ADAMTS6Q9UKP5 1117 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 MFSD11O43934 449 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 TSPAN1O60635 241 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 RALBP11234 206 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 MYL4P12829 197 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 ITGAXP20702 1163 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 MAP2K5Q13163 448 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 PEX6Q13608 980 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 LRRC36Q1X8D7 754 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 ZNF484Q5JVG2 852 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 AP1ARQ63HQ0 302 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 RASSF3Q86WH2 238 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 NT5DC4Q86YG4 428 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 TRIM4Q9C037 500 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 FAM96AQ9H5X1 160 aa18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 EIF2B3Q9NR50 452 aaKnown RBP18.81■□□□□ 0.6
PCDHA1-202ENST00000394633 E2F8A0AVK6 867 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 RNF103O00237 685 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 ERVK-10P10266 1014 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 LCP1P13796 627 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 RAB27AP51159 221 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 SNX16P57768 344 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 CAP1Q01518 475 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 MSLNQ13421 630 aaPredicted RBP18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 ITGA9Q13797 1035 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 RBBP5Q15291 538 aaKnown RBP18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 MTHFD1LQ6UB35 978 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 CES3Q6UWW8 571 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 ACAD11Q709F0 780 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 PHTF2Q8N3S3 785 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 CCDC124Q96CT7 223 aaKnown RBP18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 SF3B1O75533 1304 aaKnown RBP eCLIP18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 CA12O43570 354 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 SMPD1P17405 629 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 NCF2P19878 526 aaPredicted RBP18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 CYP2B6P20813 491 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 PSMB4P28070 264 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 TYK2P29597 1187 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 DEUP1Q05D60 604 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 FRMD7Q6ZUT3 714 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 HACE1Q8IYU2 909 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 EFCAB3Q8N7B9 438 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 C7orf31Q8N865 590 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 AZIN2Q96A70 460 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 LENG1Q96BZ8 264 aaPredicted RBP18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 PGLYRP2Q96PD5 576 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 CCDC28BQ9BUN5 200 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 POMPQ9Y244 141 aa18.8■□□□□ 0.6
PCDHA1-202ENST00000394633 RBM47A0AV96 593 aaKnown RBP18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 YY1P25490 414 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 MLH1P40692 756 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 CDK7P50613 346 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 ARHGAP17Q68EM7 881 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 CMC1Q7Z7K0 106 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 DEFB107AQ8IZN7 70 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 JADE3Q92613 823 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 CMTM5Q96DZ9 223 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 P2RY11Q96G91 374 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 OXCT2Q9BYC2 517 aaPredicted RBP18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 GJD2Q9UKL4 321 aa18.79■□□□□ 0.6
PCDHA1-202ENST00000394633 OPHN1O60890 802 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 ZMPSTE24O75844 475 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 CCDC130P13994 396 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 CPA3P15088 417 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 PEX2P28328 305 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 ADORA2BP29275 332 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 GP5P40197 560 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 ARL4AP40617 200 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 CUL3Q13618 768 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 FAM131BQ86XD5 332 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 HPS6Q86YV9 775 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 PLD6Q8N2A8 252 aaKnown RBP18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 OR6B3Q8NGW1 331 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 ZMAT2Q96NC0 199 aaKnown RBP18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 KLHL4Q9C0H6 718 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 ABHD16BQ9H3Z7 469 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 SNX15Q9NRS6 342 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 FZD10Q9ULW2 581 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 LOC100653049A0A140TA62 436 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 TNPO2O14787 897 aaKnown RBP18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 ZBTB14O43829 449 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 KRT34O76011 436 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 MX2P20592 715 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 GRM5P41594 1212 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 AQP4P55087 323 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 USP4Q13107 963 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 TCHHL1Q5QJ38 904 aaPredicted RBP18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 DCLK2Q8N568 766 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 ZNF784Q8NCA9 323 aaPredicted RBP18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 HIPK4Q8NE63 616 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 GDPD5Q8WTR4 605 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 NLRP7Q8WX94 980 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 PGBD4Q96DM1 585 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 CERS2Q96G23 380 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 CAPNS2Q96L46 248 aa18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 FCRL3Q96P31 734 aaPredicted RBP18.78■□□□□ 0.6
PCDHA1-202ENST00000394633 NAT9Q9BTE0 207 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms