RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 PGM1P36871 562 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 CLCNKBP51801 687 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 MAP2K5Q13163 448 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 PAN2Q504Q3 1202 aaKnown RBP20.07■□□□□ 0.8
RCCD1-201ENST00000394258 TRIM42Q8IWZ5 723 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 PCED1BQ96HM7 432 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 PAAF1Q9BRP4 392 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 AP5M1Q9H0R1 490 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 DDIT4Q9NX09 232 aa20.07■□□□□ 0.8
RCCD1-201ENST00000394258 RCOR3Q9P2K3 495 aaPredicted RBP20.07■□□□□ 0.8
RCCD1-201ENST00000394258 HBS1LQ9Y450 684 aaKnown RBP20.07■□□□□ 0.8
RCCD1-201ENST00000394258 NIPAL4Q0D2K0 466 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 DPYSQ14117 519 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 CCDC6Q16204 474 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 RASSF3Q86WH2 238 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 RBM15BQ8NDT2 890 aaKnown RBP20.06■□□□□ 0.8
RCCD1-201ENST00000394258 ZNF778Q96MU6 729 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 PPP1R10Q96QC0 940 aaKnown RBP20.06■□□□□ 0.8
RCCD1-201ENST00000394258 SMOQ99835 787 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 FERMT1Q9BQL6 677 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 TUBB6Q9BUF5 446 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 ZNF358Q9NW07 568 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 MIOSQ9NXC5 875 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 PRR5-ARHGAP8B1AHC4 643 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 SNNO75324 88 aaPredicted RBP20.06■□□□□ 0.8
RCCD1-201ENST00000394258 ALDH1A2O94788 518 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 CELF2O95319 508 aaKnown RBP20.06■□□□□ 0.8
RCCD1-201ENST00000394258 GNAT1P11488 350 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 PGAM1P18669 254 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 GLUD2P49448 558 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 ARHGAP8P85298 464 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 THOC5Q13769 683 aaKnown RBP20.06■□□□□ 0.8
RCCD1-201ENST00000394258 STEAP4Q687X5 459 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 HACE1Q8IYU2 909 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 C3orf58Q8NDZ4 430 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 AZIN2Q96A70 460 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 FAM161BQ96MY7 647 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 FCRL3Q96P31 734 aaPredicted RBP20.06■□□□□ 0.8
RCCD1-201ENST00000394258 NMRK1Q9NWW6 199 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 UBP1Q9NZI7 540 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 TXNDC16Q9P2K2 825 aa20.06■□□□□ 0.8
RCCD1-201ENST00000394258 PDCD11Q14690 1871 aaKnown RBP20.06■□□□□ 0.8
RCCD1-201ENST00000394258 CCDC78A2IDD5 438 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 CASTOR2A6NHX0 329 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 HAS3O00219 553 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 TBX10O75333 385 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 ITGA2BP08514 1039 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 MLNP12872 115 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 TPI1P60174 286 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 MARK2Q7KZI7 788 aaKnown RBP20.05■□□□□ 0.8
RCCD1-201ENST00000394258 NPWQ8N729 165 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 DNAAF3Q8N9W5 541 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 SMC1BQ8NDV3 1235 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 GSTCDQ8NEC7 633 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 SLC2A13Q96QE2 648 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 SYT15Q9BQS2 421 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 WASF2Q9Y6W5 498 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 GABRDO14764 452 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 DCLK1O15075 740 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 CPT1AP50416 773 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 MXRA7P84157 204 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 CMC1Q7Z7K0 106 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 ZMIZ2Q8NF64 920 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 MKS1Q9NXB0 559 aa20.05■□□□□ 0.8
RCCD1-201ENST00000394258 MEI4A8MW99 385 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 PSMG1O95456 288 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 MORN1Q5T089 497 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 SNX30Q5VWJ9 437 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 DNAJC9Q8WXX5 260 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 KCTD13Q8WZ19 329 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 APBB2Q92870 758 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 WDR6Q9NNW5 1121 aaKnown RBP20.04■□□□□ 0.8
RCCD1-201ENST00000394258 MYADML2A6NDP7 307 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 ZBTB24O43167 697 aaPredicted RBP20.04■□□□□ 0.8
RCCD1-201ENST00000394258 ATP9BO43861 1147 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 PTPN3P26045 913 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 TYK2P29597 1187 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 LRPAP1P30533 357 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 DAOAP59103 153 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 PAFAH1B3Q15102 231 aaKnown RBP20.04■□□□□ 0.8
RCCD1-201ENST00000394258 MUM1Q2TAK8 710 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 TIFABQ6ZNK6 161 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 FAM35AQ86V20 835 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 PSTKQ8IV42 348 aaKnown RBP20.04■□□□□ 0.8
RCCD1-201ENST00000394258 UPF1Q92900 1129 aaKnown RBP eCLIP20.04■□□□□ 0.8
RCCD1-201ENST00000394258 ZNF669Q96BR6 464 aaPredicted RBP20.04■□□□□ 0.8
RCCD1-201ENST00000394258 TSC22D3Q99576 134 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 ST3GAL5Q9UNP4 418 aa20.04■□□□□ 0.8
RCCD1-201ENST00000394258 SNUPNO95149 360 aaKnown RBP20.03■□□□□ 0.8
RCCD1-201ENST00000394258 POLBP06746 335 aa20.03■□□□□ 0.8
RCCD1-201ENST00000394258 TPH1P17752 444 aa20.03■□□□□ 0.8
RCCD1-201ENST00000394258 FSCN1Q16658 493 aaKnown RBP20.03■□□□□ 0.8
RCCD1-201ENST00000394258 BNIPLQ7Z465 357 aa20.03■□□□□ 0.8
RCCD1-201ENST00000394258 CELF6Q96J87 481 aaKnown RBP20.03■□□□□ 0.8
RCCD1-201ENST00000394258 AGAP2Q99490 1192 aa20.03■□□□□ 0.8
RCCD1-201ENST00000394258 WWP1Q9H0M0 922 aa20.03■□□□□ 0.8
RCCD1-201ENST00000394258 DNAJC16Q9Y2G8 782 aa20.03■□□□□ 0.8
RCCD1-201ENST00000394258 SHROOM3Q8TF72 1996 aa20.03■□□□□ 0.8
RCCD1-201ENST00000394258 GOLGA8TH3BQL2 631 aa20.03■□□□□ 0.8
RCCD1-201ENST00000394258 C6orf222P0C671 652 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms