RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 GDF9O60383 454 aa31.71■■■□□ 2.67
CMTM4-202ENST00000394106 GJB6O95452 261 aa31.71■■■□□ 2.67
CMTM4-202ENST00000394106 CTSOP43234 321 aaPredicted RBP31.71■■■□□ 2.67
CMTM4-202ENST00000394106 ATP11AP98196 1134 aa31.71■■■□□ 2.67
CMTM4-202ENST00000394106 PTP4A2Q12974 167 aa31.71■■■□□ 2.67
CMTM4-202ENST00000394106 CAMK2GQ13555 558 aaPredicted RBP31.71■■■□□ 2.67
CMTM4-202ENST00000394106 ZSCAN23Q3MJ62 389 aa31.71■■■□□ 2.67
CMTM4-202ENST00000394106 ARCQ7LC44 396 aa31.71■■■□□ 2.67
CMTM4-202ENST00000394106 OR2T3Q8NH03 318 aa31.71■■■□□ 2.67
CMTM4-202ENST00000394106 TMPRSS4Q9NRS4 437 aa31.71■■■□□ 2.67
CMTM4-202ENST00000394106 A0A1W2PQC6 194 aa31.7■■■□□ 2.67
CMTM4-202ENST00000394106 LRRC53A6NM62 1247 aa31.7■■■□□ 2.67
CMTM4-202ENST00000394106 I6L893 689 aaPredicted RBP31.7■■■□□ 2.67
CMTM4-202ENST00000394106 PDGFRAP16234 1089 aa31.7■■■□□ 2.67
CMTM4-202ENST00000394106 RDXP35241 583 aaKnown RBP31.7■■■□□ 2.67
CMTM4-202ENST00000394106 PLEKHG6Q3KR16 790 aa31.7■■■□□ 2.67
CMTM4-202ENST00000394106 LYSMD4Q5XG99 296 aa31.7■■■□□ 2.67
CMTM4-202ENST00000394106 PHF13Q86YI8 300 aaPredicted RBP31.7■■■□□ 2.67
CMTM4-202ENST00000394106 MTG2Q9H4K7 406 aa31.7■■■□□ 2.67
CMTM4-202ENST00000394106 MYO6Q9UM54 1294 aa31.7■■■□□ 2.67
CMTM4-202ENST00000394106 ERVW-1Q9UQF0 538 aa31.7■■■□□ 2.67
CMTM4-202ENST00000394106 NDUFS2O75306 463 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 CALB1P05937 261 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 ACADMP11310 421 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 SDHBP21912 280 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 PUM1Q14671 1186 aaKnown RBP eCLIP31.69■■■□□ 2.66
CMTM4-202ENST00000394106 CDO1Q16878 200 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 SKOR2Q2VWA4 1001 aaPredicted RBP31.69■■■□□ 2.66
CMTM4-202ENST00000394106 SPDYCQ5MJ68 293 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 IRF2BP2Q7Z5L9 587 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 METTL3Q86U44 580 aaKnown RBP31.69■■■□□ 2.66
CMTM4-202ENST00000394106 FAM131BQ86XD5 332 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 JOSD2Q8TAC2 188 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 NETO1Q8TDF5 533 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 RXFP2Q8WXD0 754 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 MRGPRX3Q96LB0 322 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 PRSS16Q9NQE7 514 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 TMEM51Q9NW97 253 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 DLL3Q9NYJ7 618 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 SUN2Q9UH99 717 aa31.69■■■□□ 2.66
CMTM4-202ENST00000394106 TNRC6BQ9UPQ9 1833 aaKnown RBP31.69■■■□□ 2.66
CMTM4-202ENST00000394106 GOLGA6L19H0YKK7 550 aa31.68■■■□□ 2.66
CMTM4-202ENST00000394106 MZF1P28698 734 aaPredicted RBP31.68■■■□□ 2.66
CMTM4-202ENST00000394106 SDC4P31431 198 aa31.68■■■□□ 2.66
CMTM4-202ENST00000394106 ECT2LQ008S8 904 aa31.68■■■□□ 2.66
CMTM4-202ENST00000394106 NR1I3Q14994 352 aa31.68■■■□□ 2.66
CMTM4-202ENST00000394106 RNF219Q5W0B1 726 aaPredicted RBP31.68■■■□□ 2.66
CMTM4-202ENST00000394106 CXorf57Q6NSI4 855 aaKnown RBP31.68■■■□□ 2.66
CMTM4-202ENST00000394106 MYO19Q96H55 970 aa31.68■■■□□ 2.66
CMTM4-202ENST00000394106 SELENOOQ9BVL4 669 aa31.68■■■□□ 2.66
CMTM4-202ENST00000394106 ITM2CQ9NQX7 267 aa31.68■■■□□ 2.66
CMTM4-202ENST00000394106 RXFP3Q9NSD7 469 aa31.68■■■□□ 2.66
CMTM4-202ENST00000394106 USP36Q9P275 1121 aaKnown RBP31.68■■■□□ 2.66
CMTM4-202ENST00000394106 ATXN2Q99700 1313 aaKnown RBP31.68■■■□□ 2.66
CMTM4-202ENST00000394106 CEP250Q9BV73 2442 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP31.67■■■□□ 2.66
CMTM4-202ENST00000394106 KRT3P12035 628 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 CD6P30203 668 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 TPMTP51580 245 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 FANCCQ00597 558 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 ZNF177Q13360 481 aaPredicted RBP31.67■■■□□ 2.66
CMTM4-202ENST00000394106 SLC12A1Q13621 1099 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 ASIC2Q16515 512 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 C15orf59Q2T9L4 293 aaPredicted RBP31.67■■■□□ 2.66
CMTM4-202ENST00000394106 MON1BQ7L1V2 547 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 BNIPLQ7Z465 357 aa31.67■■■□□ 2.66
CMTM4-202ENST00000394106 C2CD4BA6NLJ0 364 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 PATE3B3GLJ2 98 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 SRPRAP08240 638 aaKnown RBP31.66■■■□□ 2.66
CMTM4-202ENST00000394106 TNFAIP3P21580 790 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 ITPKAP23677 461 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 OXCT1P55809 520 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 CCDC14Q49A88 953 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 RAB6CQ53S08 254 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 LRRC31Q6UY01 552 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 TOE1Q96GM8 510 aaKnown RBP31.66■■■□□ 2.66
CMTM4-202ENST00000394106 RPL10LQ96L21 214 aaKnown RBP31.66■■■□□ 2.66
CMTM4-202ENST00000394106 RAB6CQ9H0N0 254 aa31.66■■■□□ 2.66
CMTM4-202ENST00000394106 CLDN11O75508 207 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 CNTN5O94779 1100 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 CDH4P55283 916 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 GSCP56915 257 aaPredicted RBP31.65■■■□□ 2.66
CMTM4-202ENST00000394106 ZNF33AQ06730 810 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 C5orf22Q49AR2 442 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 SH3PXD2AQ5TCZ1 1133 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 SFMBT2Q5VUG0 894 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 SYT12Q8IV01 421 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 C3orf20Q8ND61 904 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 OR52K2Q8NGK3 314 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 HSPA12BQ96MM6 686 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 FBRSQ9HAH7 460 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 TMEM74BQ9NUR3 256 aa31.65■■■□□ 2.66
CMTM4-202ENST00000394106 TTC34A8MYJ7 566 aa31.64■■■□□ 2.66
CMTM4-202ENST00000394106 KHNYNO15037 678 aaKnown RBP31.64■■■□□ 2.66
CMTM4-202ENST00000394106 ENDOD1O94919 500 aa31.64■■■□□ 2.66
CMTM4-202ENST00000394106 RFC1P35251 1148 aaPredicted RBP31.64■■■□□ 2.66
CMTM4-202ENST00000394106 STK19P49842 368 aaPredicted RBP31.64■■■□□ 2.66
CMTM4-202ENST00000394106 C1QBPQ07021 282 aaKnown RBP31.64■■■□□ 2.66
CMTM4-202ENST00000394106 HNRNPA1L2Q32P51 320 aaKnown RBP31.64■■■□□ 2.66
CMTM4-202ENST00000394106 ALFQ53S48 1182 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms