RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 FAM149B1Q96BN6 582 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 FAM81BQ96LP2 452 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 ACE2Q9BYF1 805 aaPredicted RBP18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 POPDC2Q9HBU9 364 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 ERVW-1Q9UQF0 538 aa18.1■□□□□ 0.49
SNRPA1-202ENST00000394082 APOEP02649 317 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 AFPP02771 609 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 BMP6P22004 513 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 CCR5P51681 352 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 YWHAZP63104 245 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 MTA1Q13330 715 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 MORC3Q14149 939 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 TTC39BQ5VTQ0 682 aaPredicted RBP18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 SYPL2Q5VXT5 272 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 ADAT2Q7Z6V5 191 aaKnown RBP18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 TAC4Q86UU9 113 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 NELFBQ8WX92 580 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 MYEOVQ96EZ4 313 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 THAP9Q9H5L6 903 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 ST7Q9NRC1 585 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 TJP2Q9UDY2 1190 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 BTBD3Q9Y2F9 522 aa18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 COL5A1P20908 1838 aaPredicted RBP18.09■□□□□ 0.49
SNRPA1-202ENST00000394082 CELSR3Q9NYQ7 3312 aa18.08■□□□□ 0.49
SNRPA1-202ENST00000394082 LOC400499M0QZD8 3231 aa18.08■□□□□ 0.49
SNRPA1-202ENST00000394082 TMEM131Q92545 1883 aa18.08■□□□□ 0.49
SNRPA1-202ENST00000394082 A0A1B0GTQ1 180 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 E9PAM4 449 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 H0Y8X5 98 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 CAPN9O14815 690 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 YKT6O15498 198 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 ADH1BP00325 375 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 GLI1P08151 1106 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 SLC2A3P11169 496 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 CDK4P11802 303 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 C5AR1P21730 350 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 SLC8A1P32418 973 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 PLK1P53350 603 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 OXCT1P55809 520 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 C21orf59P57076 290 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 SULT2A1Q06520 285 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 ELAVL3Q14576 367 aaKnown RBP18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 SMAD1Q15797 465 aaKnown RBP18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 DHX40Q8IX18 779 aaKnown RBP18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 ZNF606Q8WXB4 792 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 FAM131CQ96AQ9 280 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 FAM129BQ96TA1 746 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 NEUROG2Q9H2A3 272 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 MTG2Q9H4K7 406 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 SLC12A6Q9UHW9 1150 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 PCDHGA1Q9Y5H4 931 aa18.08■□□□□ 0.48
SNRPA1-202ENST00000394082 A0A1W2PP55 124 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 KCNU1A8MYU2 1149 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 MID1O15344 667 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 FGFR1OPO95684 399 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 TRUB2O95900 331 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 GOT1P17174 413 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 NNMTP40261 264 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 KCNT1Q5JUK3 1230 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 RNF219Q5W0B1 726 aaPredicted RBP18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 ISM2Q6H9L7 571 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 KLHL10Q6JEL2 608 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 NCEH1Q6PIU2 408 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 SND1Q7KZF4 910 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 MMAAQ8IVH4 418 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 LGI2Q8N0V4 545 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 CFAP52Q8N1V2 620 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 ATP6V0D2Q8N8Y2 350 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 GANCQ8TET4 914 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 PTPRN2Q92932 1015 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 PPP1R9BQ96SB3 815 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 ELF4Q99607 663 aaPredicted RBP18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 PRMT1Q99873 361 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 OMDQ99983 421 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 INTS2Q9H0H0 1204 aaKnown RBP18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 KDM4CQ9H3R0 1056 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 SCUBE2Q9NQ36 999 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 ASNSD1Q9NWL6 643 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 SERGEFQ9UGK8 458 aa18.07■□□□□ 0.48
SNRPA1-202ENST00000394082 ACACAQ13085 2346 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 TTC34A8MYJ7 566 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 E5RJQ4 531 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 F5H5T6 163 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 RNASEH2AO75792 299 aaKnown RBP18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 CALCAP01258 141 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 KRT5P13647 590 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 TACR2P21452 398 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 NUDT1P36639 197 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 PAK1Q13153 545 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 CAMK2BQ13554 666 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 BECN1Q14457 450 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 KCNJ12Q14500 433 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 ZC3H12AQ5D1E8 599 aaKnown RBP18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 DENND1BQ6P3S1 775 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 MMS22LQ6ZRQ5 1243 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 CHSY1Q86X52 802 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 ADAM32Q8TC27 787 aa18.06■□□□□ 0.48
SNRPA1-202ENST00000394082 ERVMER34-1Q9H9K5 563 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms