RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 RPS6KA2Q15349 733 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 C10orf120Q5SQS8 335 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 OTOP3Q7RTS5 596 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 C10orf82Q8WW14 230 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 HDAC11Q96DB2 347 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 IFT43Q96FT9 208 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 CYP4F12Q9HCS2 524 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 CHRAC1Q9NRG0 131 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 SERPINB8P50452 374 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 UBAP2LQ14157 1087 aaKnown RBP19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 ARRDC4Q8NCT1 418 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 FAM13CQ8NE31 585 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 MPP6Q9NZW5 540 aa19.24■□□□□ 0.67
SMARCC2-203ENST00000394023 ARL5CA6NH57 179 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 LUC7L3O95232 432 aaKnown RBP19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 PDCD2Q16342 344 aaPredicted RBP19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 GRAMD1BQ3KR37 738 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 FSCBQ5H9T9 825 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 ZNF467Q7Z7K2 595 aaPredicted RBP19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 NT5MQ9NPB1 228 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 ZNF358Q9NW07 568 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 MORF4L1Q9UBU8 362 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 UPP2O95045 317 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 IL4RP24394 825 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 CNTFP26441 200 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 PCBP1Q15365 356 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■■■□□ 15.9
SMARCC2-203ENST00000394023 IFNLR1Q8IU57 520 aaPredicted RBP19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 TMEM86AQ8N2M4 240 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 SCAMP5Q8TAC9 235 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 DENND1AQ8TEH3 1009 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 ARHGEF38Q9NXL2 777 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 PADI3Q9ULW8 664 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 MANSC4A6NHS7 340 aaPredicted RBP19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 PIRO00625 290 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 CCR1P32246 355 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 SERPINB5P36952 375 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 ACAD11Q709F0 780 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 C10orf107Q8IVU9 208 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 KBTBD7Q8WVZ9 684 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 CNGB3Q9NQW8 809 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 ANGPTL2Q9UKU9 493 aa19.23■□□□□ 0.67
SMARCC2-203ENST00000394023 VAV1P15498 845 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 TPSB2P20231 275 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 GCKP35557 465 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 GMPRP36959 345 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 TPSAB1Q15661 275 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 VCXQ9H320 206 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 CDH9Q9ULB4 789 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 C15orf41Q9Y2V0 281 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 MCM3APO60318 1980 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 NCAM2O15394 837 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 ZMPSTE24O75844 475 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 LRIG2O94898 1065 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 FCGRTP55899 365 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 SPATA22Q8NHS9 363 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 UPF1Q92900 1129 aaKnown RBP eCLIP19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 RPRD1AQ96P16 312 aaPredicted RBP19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 UBA6A0AVT1 1052 aaPredicted RBP19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 GIPC1O14908 333 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 AFF1P51825 1210 aaKnown RBP19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 CDH17Q12864 832 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 PREPLQ4J6C6 727 aaPredicted RBP19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 TIGD5Q53EQ6 642 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 PNPOQ9NVS9 261 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 SERPINE1P05121 402 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 DAOAP59103 153 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 KLC3Q6P597 504 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 SIGLEC10Q96LC7 697 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 AGAP2Q99490 1192 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 PAAF1Q9BRP4 392 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 SAR1AQ9NR31 198 aa19.22■□□□□ 0.67
SMARCC2-203ENST00000394023 LOXHD1Q8IVV2 1947 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 E7ESA3 106 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 FAM72CH0Y354 149 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 BPGMP07738 259 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 FLT3LGP49771 235 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 DLG2Q15700 870 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 RABGAP1LQ5R372 815 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 FAM72AQ5TYM5 149 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 FAM72DQ6L9T8 149 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 CGB2Q6NT52 195 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 FAM72BQ86X60 149 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 EFCAB3Q8N7B9 438 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 DNAJC9Q8WXX5 260 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 MS4A4AQ96JQ5 239 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 GLT1D1Q96MS3 346 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 TRIM62Q9BVG3 475 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 CXorf56Q9H5V9 222 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 NDE1Q9NXR1 346 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 PACSIN3Q9UKS6 424 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 NVLO15381 856 aaKnown RBP19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 ANXA9O76027 345 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 TOMM70O94826 608 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 MT-CO1P00395 513 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 USP4Q13107 963 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 CTBP1Q13363 440 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 ZNF235Q14590 738 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 MAPRE1Q15691 268 aaKnown RBP19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 DDR2Q16832 855 aa19.21■□□□□ 0.67
SMARCC2-203ENST00000394023 TNFAIP8L3Q5GJ75 292 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms