RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 GJD3Q8N144 294 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 ALG3Q92685 438 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 OLFM3Q96PB7 478 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 TSGA13Q96PP4 275 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
USP44-202ENST00000393091 NOL6Q9H6R4 1146 aaKnown RBP13.65□□□□□ -0.22
USP44-202ENST00000393091 BRWD1Q9NSI6 2320 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 EEF2KO00418 725 aaKnown RBP13.65□□□□□ -0.22
USP44-202ENST00000393091 HMBSP08397 361 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 BBS12Q6ZW61 710 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 PLPP6Q8IY26 295 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 PYROXD2Q8N2H3 581 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 KRT35Q92764 455 aa13.65□□□□□ -0.22
USP44-202ENST00000393091 KIAA1522Q9P206 1035 aaPredicted RBP13.65□□□□□ -0.22
USP44-202ENST00000393091 TYW5A2RUC4 315 aaKnown RBP13.65□□□□□ -0.23
USP44-202ENST00000393091 PI4K2BG5E9Z4 385 aa13.65□□□□□ -0.23
USP44-202ENST00000393091 TYRP14679 529 aa13.65□□□□□ -0.23
USP44-202ENST00000393091 C6orf118Q5T5N4 469 aa13.65□□□□□ -0.23
USP44-202ENST00000393091 ZSCAN30Q86W11 494 aa13.65□□□□□ -0.23
USP44-202ENST00000393091 PCDH19Q8TAB3 1148 aa13.65□□□□□ -0.23
USP44-202ENST00000393091 CSGALNACT1Q8TDX6 532 aa13.65□□□□□ -0.23
USP44-202ENST00000393091 CASKIN2Q8WXE0 1202 aa13.65□□□□□ -0.23
USP44-202ENST00000393091 BRD9Q9H8M2 597 aa13.65□□□□□ -0.23
USP44-202ENST00000393091 NCAM2O15394 837 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 ZNF500O60304 480 aaPredicted RBP13.64□□□□□ -0.23
USP44-202ENST00000393091 ZRANB2O95218 330 aaKnown RBP eCLIP13.64□□□□□ -0.23
USP44-202ENST00000393091 ARL4AP40617 200 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 XRCC4Q13426 336 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 GRM2Q14416 872 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 NCBP2-AS2Q69YL0 99 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 DRICH1Q6PGQ1 229 aaPredicted RBP13.64□□□□□ -0.23
USP44-202ENST00000393091 ARHGAP12Q8IWW6 846 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 AHI1Q8N157 1196 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 PCSK1NQ9UHG2 260 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 SPECC1L-ADORA2AF8WAN1 911 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 ASLP04424 464 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 DRD1P21728 446 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 TPI1P60174 286 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 ETF1P62495 437 aaKnown RBP13.64□□□□□ -0.23
USP44-202ENST00000393091 MLF2Q15773 248 aaPredicted RBP13.64□□□□□ -0.23
USP44-202ENST00000393091 DAB2IPQ5VWQ8 1189 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 SCYL2Q6P3W7 929 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 METTL3Q86U44 580 aaKnown RBP13.64□□□□□ -0.23
USP44-202ENST00000393091 KCTD6Q8NC69 237 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 CCDC26Q8TAB7 109 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 ACTRT1Q8TDG2 376 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 EDAQ92838 391 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 ZNF599Q96NL3 588 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 DHX35Q9H5Z1 703 aaKnown RBP13.64□□□□□ -0.23
USP44-202ENST00000393091 PDFQ9HBH1 243 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 RNF14Q9UBS8 474 aa13.64□□□□□ -0.23
USP44-202ENST00000393091 TBL1XO60907 577 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 ZMPSTE24O75844 475 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 SRPRAP08240 638 aaKnown RBP13.63□□□□□ -0.23
USP44-202ENST00000393091 GOT1P17174 413 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 CTHP32929 405 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 SLC20A2Q08357 652 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 GALNT2Q10471 571 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 TUBB2AQ13885 445 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 TFDP2Q14188 446 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 RPS6KA1Q15418 735 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 ALFQ53S48 1182 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 BMP8AQ7Z5Y6 402 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 ANKS1BQ7Z6G8 1248 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 PLD5Q8N7P1 536 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 CLDN23Q96B33 292 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 NELL2Q99435 816 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 PSMB7Q99436 277 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 TUBB2BQ9BVA1 445 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 EBF3Q9H4W6 596 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 AMACRQ9UHK6 382 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 SNX12Q9UMY4 172 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 XIRP2A4UGR9 3374 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 CHURC1-FNTBB4DL54 471 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 GRIA2P42262 883 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 MARCKSL1P49006 195 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 CDH6P55285 790 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 SULT2A1Q06520 285 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 ATP13A4Q4VNC1 1196 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 SLC44A4Q53GD3 710 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 RFWD3Q6PCD5 774 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 ARHGEF2Q92974 986 aaKnown RBP13.63□□□□□ -0.23
USP44-202ENST00000393091 SHDQ96IW2 340 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 PNKPQ96T60 521 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 CD320Q9NPF0 282 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 VANGL2Q9ULK5 521 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 MYOFQ9NZM1 2061 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 FANCGO15287 622 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 KDELR3O43731 214 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 RPS9P46781 194 aaKnown RBP13.63□□□□□ -0.23
USP44-202ENST00000393091 IRAK1P51617 712 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 FZD5Q13467 585 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 ASTLQ6HA08 431 aaPredicted RBP13.63□□□□□ -0.23
USP44-202ENST00000393091 ADIPOR2Q86V24 386 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 KLHDC8BQ8IXV7 354 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 SLC35F6Q8N357 371 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 DCAF4L2Q8NA75 395 aa13.63□□□□□ -0.23
USP44-202ENST00000393091 TRIM44Q96DX7 344 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms