RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 CCSER2Q9H7U1 834 aa18.13■□□□□ 0.49
SHTN1-203ENST00000392901 NDFIP2Q9NV92 336 aa18.13■□□□□ 0.49
SHTN1-203ENST00000392901 VANGL2Q9ULK5 521 aa18.13■□□□□ 0.49
SHTN1-203ENST00000392901 COL4A6Q14031 1691 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 SLC12A8A0AV02 714 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 RASA4BC9J798 803 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 RASA4O43374 803 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 SEC24AO95486 1093 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 APOEP02649 317 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 TUFMP49411 452 aaKnown RBP18.12■□□□□ 0.49
SHTN1-203ENST00000392901 SRLQ86TD4 932 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 TMEM199Q8N511 208 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 BRD8Q9H0E9 1235 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 OLA1Q9NTK5 396 aaKnown RBP18.12■□□□□ 0.49
SHTN1-203ENST00000392901 PIH1D1Q9NWS0 290 aaKnown RBP18.12■□□□□ 0.49
SHTN1-203ENST00000392901 MAD1L1Q9Y6D9 718 aa18.12■□□□□ 0.49
SHTN1-203ENST00000392901 ANKRD65E5RJM6 399 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 FGF10O15520 208 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 TLR5O60602 858 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 DNAJB2P25686 324 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 GEMIN4P57678 1058 aaKnown RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 SARNPP82979 210 aaKnown RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 ZBTB17Q13105 803 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 ARHGAP36Q6ZRI8 547 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 TRABD2AQ86V40 505 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 MPP5Q8N3R9 675 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 DNAJC5GQ8N7S2 189 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 ZNF461Q8TAF7 563 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 AUTS2Q8WXX7 1259 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 ZNF317Q96PQ6 595 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 YME1L1Q96TA2 773 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 ACSS3Q9H6R3 686 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 KIF9Q9HAQ2 790 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 RC3H2Q9HBD1 1191 aaKnown RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 CYP4F11Q9HBI6 524 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 COMMD8Q9NX08 183 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 ZC3H7BQ9UGR2 993 aaKnown RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 RRP15Q9Y3B9 282 aaKnown RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 TCRBV9S1A1TA0A576 114 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 KIAA0355O15063 1070 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 ZBTB24O43167 697 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 DRD4P21917 467 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 HOXC13P31276 330 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 TRIP4Q15650 581 aaPredicted RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 ARTNQ5T4W7 220 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 CHMP6Q96FZ7 201 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 C1orf74Q96LT6 269 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 TMEM106CQ9BVX2 250 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 IGSF9Q9P2J2 1179 aa18.11■□□□□ 0.49
SHTN1-203ENST00000392901 AFF4Q9UHB7 1163 aaKnown RBP18.11■□□□□ 0.49
SHTN1-203ENST00000392901 CPP00450 1065 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 JCHAINP01591 159 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 HTR7P34969 479 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 DSG1Q02413 1049 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 SPARCL1Q14515 664 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 KLHL38Q2WGJ6 581 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 MS4A13Q5J8X5 152 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 ARHGAP12Q8IWW6 846 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 ZNF512Q96ME7 567 aaPredicted RBP18.1■□□□□ 0.49
SHTN1-203ENST00000392901 TRIM56Q9BRZ2 755 aaKnown RBP18.1■□□□□ 0.49
SHTN1-203ENST00000392901 SLC39A8Q9C0K1 460 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 XAB2Q9HCS7 855 aaKnown RBP18.1■□□□□ 0.49
SHTN1-203ENST00000392901 SPG21Q9NZD8 308 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 SLC24A2Q9UI40 661 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 GREB1Q4ZG55 1949 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 A0A1W2PPM1 405 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 MTSS1O43312 755 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 ZDHHC11BP0C7U3 371 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 TSHRP16473 764 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 LAG3P18627 525 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 KRT15P19012 456 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 MAGEA3P43357 314 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 TEX44Q53QW1 395 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHTN1-203ENST00000392901 ATP6V0D2Q8N8Y2 350 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 USP33Q8TEY7 942 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 SIGLEC10Q96LC7 697 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 PAFAH2Q99487 392 aa18.1■□□□□ 0.49
SHTN1-203ENST00000392901 UBE2OQ9C0C9 1292 aaKnown RBP18.1■□□□□ 0.49
SHTN1-203ENST00000392901 PSMC3IPQ9P2W1 217 aaPredicted RBP18.1■□□□□ 0.49
SHTN1-203ENST00000392901 SHROOM3Q8TF72 1996 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 ZBBXA8MT70 800 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 SPAG7O75391 227 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 COG7P83436 770 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 CDK16Q00536 496 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 RAP1GAP2Q684P5 730 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 TFAP2DQ7Z6R9 452 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 CPLX4Q7Z7G2 160 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 CMTR2Q8IYT2 770 aaKnown RBP18.09■□□□□ 0.49
SHTN1-203ENST00000392901 LRRC34Q8IZ02 419 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 ATPAF2Q8N5M1 289 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 LZTR1Q8N653 840 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 RTL3Q8N8U3 475 aaKnown RBP18.09■□□□□ 0.49
SHTN1-203ENST00000392901 BTN2A3PQ96KV6 586 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 CYTH2Q99418 400 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 TTLL2Q9BWV7 592 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 ACTL7BQ9Y614 415 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 LTBP2Q14767 1821 aa18.09■□□□□ 0.49
SHTN1-203ENST00000392901 EFCAB14O75071 495 aa18.08■□□□□ 0.49
SHTN1-203ENST00000392901 ZNF189O75820 626 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms