RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SEC14L1Q92503 715 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 APBB2Q92870 758 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 HGH1Q9BTY7 390 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 C11orf49Q9H6J7 331 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 MKS1Q9NXB0 559 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 STX18Q9P2W9 335 aaKnown RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 CDH9Q9ULB4 789 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 LRFN2Q9ULH4 789 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 NR2E3Q9Y5X4 410 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 NRP1O14786 923 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 RNASEH1O60930 286 aaKnown RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 OR4Q2P0C623 313 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 PDGFRAP16234 1089 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 SIX1Q15475 284 aaPredicted RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 SYCP2LQ5T4T6 812 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 GPRIN1Q7Z2K8 1008 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 FAM35AQ86V20 835 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 SLC13A5Q86YT5 568 aaPredicted RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 PRELID2Q8N945 189 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 TRIM43Q96BQ3 446 aaPredicted RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 FAM193BQ96PV7 902 aaPredicted RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 KANSL3Q9P2N6 904 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 PCSK1NQ9UHG2 260 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 AMACRQ9UHK6 382 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 RGS16O15492 202 aaPredicted RBP19.48■□□□□ 0.71
CCDC50-202ENST00000392456 CLTBP09497 229 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 PLCB3Q01970 1234 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 CDO1Q16878 200 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 SEL1L2Q5TEA6 688 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 RFWD3Q6PCD5 774 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 FNIP1Q8TF40 1166 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 STARD8Q92502 1023 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 CEP295NLQ96MC4 621 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 PKMYT1Q99640 499 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 EPB41L4BQ9H329 900 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 CLK4Q9HAZ1 481 aaKnown RBP19.48■□□□□ 0.71
CCDC50-202ENST00000392456 TBKBP1A7MCY6 615 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 CCDC188H7C350 402 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 XPO1O14980 1071 aaKnown RBP19.48■□□□□ 0.71
CCDC50-202ENST00000392456 PSTPIP1O43586 416 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 PSMG1O95456 288 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 T-ENOLP0DO92 83 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 SLC25A11Q02978 314 aaKnown RBP19.48■□□□□ 0.71
CCDC50-202ENST00000392456 ADIGQ0VDE8 80 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 CCDC14Q49A88 953 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 METTL21CQ5VZV1 264 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 FAM171BQ6P995 826 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 ALDH16A1Q8IZ83 802 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 RIN3Q8TB24 985 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 TRPC4APQ8TEL6 797 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 MYLPFQ96A32 169 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 MAELQ96JY0 434 aaKnown RBP19.48■□□□□ 0.71
CCDC50-202ENST00000392456 ACBD6Q9BR61 282 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 GPR62Q9BZJ7 368 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 SSX2IPQ9Y2D8 614 aa19.48■□□□□ 0.71
CCDC50-202ENST00000392456 TANC1Q9C0D5 1861 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 SH3PXD2BA1X283 911 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 SPECC1L-ADORA2AF8WAN1 911 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 RALAP11233 206 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 SLC11A1P49279 550 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 ZNF143P52747 638 aaPredicted RBP19.47■□□□□ 0.71
CCDC50-202ENST00000392456 CACTIN-AS1Q8N1I8 211 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 PRDM5Q9NQX1 630 aaPredicted RBP19.47■□□□□ 0.71
CCDC50-202ENST00000392456 TSC2P49815 1807 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 TADA2AO75478 443 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 KRT10P13645 584 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 CSF2RAP15509 400 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 PCSK1P29120 753 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 MIPP30301 263 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 ACSBG2Q5FVE4 666 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 INTS6LQ5JSJ4 861 aaKnown RBP19.47■□□□□ 0.71
CCDC50-202ENST00000392456 METTL23Q86XA0 190 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 KATNAL2Q8IYT4 538 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 ERP27Q96DN0 273 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 VPS50Q96JG6 964 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 PEBP4Q96S96 227 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 SLITRK6Q9H5Y7 841 aa19.47■□□□□ 0.71
CCDC50-202ENST00000392456 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.47■□□□□ 0.71
CCDC50-202ENST00000392456 GPD1P21695 349 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 BDNFP23560 247 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 YWHAHQ04917 246 aaPredicted RBP19.46■□□□□ 0.71
CCDC50-202ENST00000392456 GRM2Q14416 872 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 TTC27Q6P3X3 843 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 MFSD7Q6UXD7 560 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 ANKRD13BQ86YJ7 626 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 NPAS4Q8IUM7 802 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 CROCCP3Q8IVE0 287 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 HSFY1Q96LI6 401 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 FAM118BQ9BPY3 351 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 MARCH5Q9NX47 278 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 SCHIP1Q9P0W5 487 aaPredicted RBP19.46■□□□□ 0.71
CCDC50-202ENST00000392456 NUMBLQ9Y6R0 609 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 RASA4BC9J798 803 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 RASA4O43374 803 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 ZBED1O96006 694 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 RASSF2P50749 326 aa19.46■□□□□ 0.71
CCDC50-202ENST00000392456 ATXN1P54253 815 aaKnown RBP19.46■□□□□ 0.71
CCDC50-202ENST00000392456 PKN2Q16513 984 aaKnown RBP19.46■□□□□ 0.71
CCDC50-202ENST00000392456 TNFAIP8L3Q5GJ75 292 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms