RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 RAD21L1Q9H4I0 556 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 MRPL40Q9NQ50 206 aaKnown RBP17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 GIN1Q9NXP7 522 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 DNAJB4Q9UDY4 337 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 VAV3Q9UKW4 847 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 FMN2Q9NZ56 1722 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 TRIM64CA6NLI5 447 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 NRP2O60462 931 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 CRKP46108 304 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 SLC7A2P52569 658 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 YWHAZP63104 245 aaKnown RBP17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 SLC15A2Q16348 729 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 C6orf10Q5SRN2 563 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 MPP5Q8N3R9 675 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 IFT43Q96FT9 208 aa17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 REXO4Q9GZR2 422 aaKnown RBP17.35■□□□□ 0.37
TRAF3IP1-202ENST00000391993 MYH11P35749 1972 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 APOC4-APOC2K7ER74 178 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 APOC2P02655 101 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 FGD3Q5JSP0 725 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 OR5B17Q8NGF7 314 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 RNF145Q96MT1 663 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 OXCT2Q9BYC2 517 aaPredicted RBP17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 MIR1-1HGQ9H1L0 117 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 SDR42E2A6NKP2 422 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 H0Y626 953 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 TRIM16O95361 564 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 APOA1P02647 267 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 PSAPP07602 524 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 LCP1P13796 627 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 SNX16P57768 344 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 DUOXA2Q1HG44 320 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 GATAD2AQ86YP4 633 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 CCDC106Q9BWC9 280 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 ORC6Q9Y5N6 252 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 FADS3Q9Y5Q0 445 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 CAPN15O75808 1086 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 SUPT7LO94864 414 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 LRPAP1P30533 357 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 NDST2P52849 883 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 DENND1BQ6P3S1 775 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 FNIP1Q8TF40 1166 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 MXRA8Q9BRK3 442 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 C20orf27Q9GZN8 174 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 ITM2CQ9NQX7 267 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 RGPD1P0DJD0 1748 aa17.34■□□□□ 0.37
TRAF3IP1-202ENST00000391993 TMEM191CA6NGB0 347 aa17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 ALOX12P18054 663 aa17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 ATP6V1B2P21281 511 aa17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 CCDC85BQ15834 202 aaPredicted RBP17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 KCTD8Q6ZWB6 473 aa17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 NMRAL1Q9HBL8 299 aa17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 DMAC2Q9NW81 257 aa17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.37
TRAF3IP1-202ENST00000391993 A6NL46 340 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 MYO1DO94832 1006 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 HDCP19113 662 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 CDK9P50750 372 aaKnown RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 ARPC4P59998 168 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TDRD10Q5VZ19 366 aaKnown RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 SCAIQ8N9R8 606 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 C1orf50Q9BV19 199 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 DDX43Q9NXZ2 648 aaKnown RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TUBA8Q9NY65 449 aaPredicted RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 KCND2Q9NZV8 630 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 CROTQ9UKG9 612 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 DDTLA6NHG4 134 aaPredicted RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TNPO2O14787 897 aaKnown RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 UBDO15205 165 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 RNASEH2AO75792 299 aaKnown RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 MTA2O94776 668 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 BAIAP3O94812 1187 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 ZBTB48P10074 688 aaPredicted RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 FAM83EQ2M2I3 478 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 LMO3Q8TAP4 145 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 ISOC1Q96CN7 298 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 STN1Q9H668 368 aaKnown RBP17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 FANCEQ9HB96 536 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 HMG20AQ9NP66 347 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 ROBO3Q96MS0 1386 aa17.33■□□□□ 0.36
TRAF3IP1-202ENST00000391993 BUD23O43709 281 aaKnown RBP17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 CHEK2O96017 543 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 GRIA4P48058 902 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 SERPINB10P48595 397 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TAP1Q03518 808 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 MADCAM1Q13477 382 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 LSM12Q3MHD2 195 aaKnown RBP17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 IQSEC1Q6DN90 963 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 BBS12Q6ZW61 710 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 MON1BQ7L1V2 547 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 ARCQ7LC44 396 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 UBR7Q8N806 425 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 MCPH1Q8NEM0 835 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TNIP2Q8NFZ5 429 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 PGLYRP2Q96PD5 576 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 RTKNQ9BST9 563 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 CAB39Q9Y376 341 aaPredicted RBP17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 PCDHAC2Q9Y5I4 1007 aa17.32■□□□□ 0.36
TRAF3IP1-202ENST00000391993 ADORA2BP29275 332 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms