RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 GPR162Q16538 588 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ADCK5Q3MIX3 580 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 C10orf76Q5T2E6 689 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ISM2Q6H9L7 571 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ZNF425Q6IV72 752 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 KIAA1324Q6UXG2 1013 aaKnown RBP3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 CYB5R4Q7L1T6 521 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 SYT13Q7L8C5 426 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 MDGA2Q7Z553 956 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ANKS1BQ7Z6G8 1248 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 DDIASQ8IXT1 998 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 NKAPQ8N5F7 415 aaKnown RBP3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ENDOVQ8N8Q3 282 aaKnown RBP3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 FSIP1Q8NA03 581 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 WIPF2Q8TF74 440 aaPredicted RBP3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 IGFBPL1Q8WX77 278 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 THAP4Q8WY91 577 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ATP2A3Q93084 1043 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ARRDC3Q96B67 414 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ZFYVE19Q96K21 471 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 NPAS1Q99742 590 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 TMEM79Q9BSE2 394 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 HERPUD2Q9BSE4 406 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 PIMREGQ9BSJ6 248 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 FAM167BQ9BTA0 163 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ABHD16BQ9H3Z7 469 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 PPCSQ9HAB8 311 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 G6PC2Q9NQR9 355 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 KIF17Q9P2E2 1029 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 SLC25A13Q9UJS0 675 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 AGO2Q9UKV8 859 aaKnown RBP3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 TNFSF13BQ9Y275 285 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 ZNF521Q96K83 1311 aa3.42□□□□□ -1.86
RNU6-550P-201ENST00000391057 CXorf65A6NEN9 183 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 FAM90A20PA6NIJ5 464 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 INO80B-WBP1J3KQ70 363 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 RHODO00212 210 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 SOCS2O14508 198 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 PRPF4O43172 522 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 SEPT4O43236 478 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 TFRCP02786 760 aaKnown RBP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 TMEM191BP0C7N4 346 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 PRF1P14222 555 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 LMO1P25800 156 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 ADD2P35612 726 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 HALP42357 657 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 AARSP49588 968 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 RBM5P52756 815 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 OAZ1P54368 228 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 CDK18Q07002 472 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 SRSF1Q07955 248 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 MTX1Q13505 466 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 CUL4BQ13620 913 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 DCTN1Q14203 1278 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 GALNT3Q14435 633 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 DLGAP5Q15398 846 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 SMAD1Q15797 465 aaKnown RBP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 MIDNQ504T8 468 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 ARL13AQ5H913 290 aaPredicted RBP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 KIAA1755Q5JYT7 1200 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 ANKRD45Q5TZF3 282 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 RTL10Q7L3V2 364 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 TMEM200AQ86VY9 491 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 KLBQ86Z14 1044 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 ARFGAP1Q8N6T3 406 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 PTGR2Q8N8N7 351 aaPredicted RBP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 EXD3Q8N9H8 876 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 SLC44A5Q8NCS7 719 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 CSGALNACT1Q8TDX6 532 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 AFG1LQ8WV93 481 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 KCNJ9Q92806 393 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 SDCCAG3Q96C92 435 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 CLMNQ96JQ2 1002 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 TXNRD2Q9NNW7 524 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 HEY2Q9UBP5 337 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 UTS2RQ9UKP6 389 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 LAMP3Q9UQV4 416 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 RCE1Q9Y256 329 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 PKP3Q9Y446 797 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 AFG3L2Q9Y4W6 797 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 HS3ST3B1Q9Y662 390 aa3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 TTBK1Q5TCY1 1321 aaPredicted RBP3.41□□□□□ -1.86
RNU6-550P-201ENST00000391057 SETD1BQ9UPS6 1966 aaKnown RBP3.4□□□□□ -1.86
RNU6-550P-201ENST00000391057 TRBV5-3A0A0A0MS03 114 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 KIR2DS5A0A0G2JLQ3 304 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 KCNJ18B7U540 433 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 KIR2DS3K7RE56 304 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 TLX3O43711 291 aaPredicted RBP3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 FAM155BO75949 473 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 TK1P04183 234 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 WNT1P04628 370 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 CYP21A2P08686 494 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 DHRS4L1P0CG22 281 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 PKMP14618 531 aaKnown RBP3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 PRPH2P23942 346 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 GSTM2P28161 218 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 ME1P48163 572 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 ACTR2P61160 394 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 ALKBH1Q13686 389 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms