RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 RAB39AQ14964 217 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SRSF7Q16629 238 aaKnown RBP eCLIP2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 TRIM60Q495X7 471 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF484Q5JVG2 852 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 PLAG1Q6DJT9 500 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC18B1Q6NT16 456 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 DCLRE1AQ6PJP8 1040 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC2A7Q6PXP3 512 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 PLPPR4Q7Z2D5 763 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 KDELC2Q7Z4H8 507 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 CHSY1Q86X52 802 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 EPHX4Q8IUS5 362 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 CCDC117Q8IWD4 279 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 HSCBQ8IWL3 235 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 CNTROBQ8N137 903 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 WDTC1Q8N5D0 677 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC15A4Q8N697 577 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 C8orf58Q8NAV2 365 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC17A8Q8NDX2 589 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 LINS1Q8NG48 757 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 OR6Y1Q8NGX8 325 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 RAPGEF4Q8WZA2 1011 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 STAMQ92783 540 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 FAM167AQ96KS9 214 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SNX27Q96L92 541 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 TRIB1Q96RU8 372 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 ADGRE3Q9BY15 652 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 MAGEB5Q9BZ81 275 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 FAM129AQ9BZQ8 928 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 IMPG2Q9BZV3 1241 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF518BQ9C0D4 1074 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 ABCG4Q9H172 646 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC25A18Q9H1K4 315 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 CXorf56Q9H5V9 222 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 WDCPQ9H6R7 721 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 MANSC1Q9H8J5 431 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 NOD2Q9HC29 1040 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SARS2Q9NP81 518 aaKnown RBP2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SEMA4BQ9NPR2 832 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLAMF7Q9NQ25 335 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 TBC1D14Q9P2M4 693 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 DKK4Q9UBT3 224 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF212Q9UDV6 495 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 CFDP1Q9UEE9 299 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 TBK1Q9UHD2 729 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZHX1Q9UKY1 873 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF215Q9UL58 517 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 C19orf53Q9UNZ5 99 aaPredicted RBP2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 SSX2IPQ9Y2D8 614 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF521Q96K83 1311 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 KDM3AQ9Y4C1 1321 aa2.36□□□□□ -2.03
SNORA40.19-201ENST00000390846 CYP2D7A0A087X1C5 515 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 FAM170AA1A519 330 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PTGES3LE9PB15 166 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 GCOM1H8Y6P7 765 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 M0QYT0 321 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 AGPSO00116 658 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 RAB27BO00194 218 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CHL1O00533 1208 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PPP6CO00743 305 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 AP3D1O14617 1153 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PPEF2O14830 753 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 KLK10O43240 276 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 HNRNPRO43390 633 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 ENTPD3O75355 529 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 OR2C1O95371 312 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 MT-ND3P03897 115 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CLEC3BP05452 202 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CSH1P0DML2 217 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CSH2P0DML3 217 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 UBL4AP11441 157 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 RARGP13631 454 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 SELLP14151 372 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 IDEP14735 1019 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 TNFRSF8P28908 595 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 TLX1P31314 330 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PIK3CGP48736 1102 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 AARSP49588 968 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 HARS2P49590 506 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CCT8P50990 548 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PAPOLAP51003 745 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF134P52741 427 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 RCAN1P53805 252 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC12A2P55011 1212 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 FAM3BP58499 235 aaPredicted RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 CYP4F2P78329 520 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PLIN5Q00G26 463 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 ITIH3Q06033 890 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 AP1B1Q10567 949 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 DCTN2Q13561 401 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC5A9Q2M3M2 681 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 TRIM71Q2Q1W2 868 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 PTCHD3Q3KNS1 767 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 BMP2KLQ5H9B9 411 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 C1orf141Q5JVX7 400 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 FAM69AQ5T7M9 428 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 ANKRD45Q5TZF3 282 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 KRT74Q7RTS7 529 aa2.35□□□□□ -2.03
SNORA40.19-201ENST00000390846 RSPH3Q86UC2 560 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms