RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 AKIP1Q9NQ31 210 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 PNPLA3Q9NST1 481 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 ANKEF1Q9NU02 776 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 TMEM216Q9P0N5 145 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 EPS15L1Q9UBC2 864 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 COPG2Q9UBF2 871 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 SUCOQ9UBS9 1254 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 CD300AQ9UGN4 299 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 GTF2IRD1Q9UHL9 959 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 PTBP2Q9UKA9 531 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 CCPG1Q9ULG6 757 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 CNOT6Q9ULM6 557 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 PAIP2BQ9ULR5 123 aaKnown RBP3.54□□□□□ -1.84
TRAV39-201ENST00000390466 CDC14AQ9UNH5 594 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 B3GNT3Q9Y2A9 372 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 TCAF1Q9Y4C2 921 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 PSAT1Q9Y617 370 aa3.54□□□□□ -1.84
TRAV39-201ENST00000390466 NUP214P35658 2090 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CCDC88CQ9P219 2028 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 A0A1W2PPW3 197 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 BCLAF3A2AJT9 711 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ARHGAP42A6NI28 874 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF487B1APH4 448 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TMEM114B3SHH9 223 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TCP10L2B9ZVM9 353 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 H0Y858 1186 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 H0YIN7 160 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 STX16-NPEPL1H3BU86 382 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TRIM38O00635 465 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 DPYSL4O14531 572 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TPP1O14773 563 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 MCF2LO15068 1137 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 AXIN1O15169 862 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ACOX3O15254 700 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 DCXO43602 365 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 EXTL3O43909 919 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 FOXD2O60548 495 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TADA2AO75478 443 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 KRT38O76015 456 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 VAPBO95292 243 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ZBTB11O95625 1053 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TRUB2O95900 331 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 JUNP05412 331 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GNAO1P09471 354 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 NCAM1P13591 858 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 P4HA1P13674 534 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PSMC3P17980 439 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CYP3A5P20815 502 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ATP6V1B2P21281 511 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GRK2P25098 689 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 MPSTP25325 297 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 RPL10P27635 214 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 MIPP30301 263 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 HMOX2P30519 316 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 YWHABP31946 246 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 RFC1P35251 1148 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 IDUAP35475 653 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 POLR2IP36954 125 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GRIA1P42261 906 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 QARSP47897 775 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SLC5A3P53794 718 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PKNOX1P55347 436 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 HDAC4P56524 1084 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SOX10P56693 466 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 NUP107P57740 925 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 EVA1CP58658 441 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ABCE1P61221 599 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 YWHAGP61981 247 aaKnown RBP eCLIP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 UBXN2AP68543 259 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 IFITM2Q01629 132 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TAP1Q03518 808 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PDAP1Q13442 181 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PICALMQ13492 652 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 NAB1Q13506 487 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 AQP6Q13520 282 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CAMK2BQ13554 666 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SEMA5AQ13591 1074 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 FLOT2Q14254 428 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ACAP1Q15027 740 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ACAP2Q15057 778 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PHKG1Q16816 387 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 KIZQ2M2Z5 673 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ABCB5Q2M3G0 1257 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SMTNL2Q2TAL5 461 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 Q3C1V9 767 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TKFCQ3LXA3 575 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 LSM12Q3MHD2 195 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 BRDTQ58F21 947 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 MTX3Q5HYI7 312 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 FGD3Q5JSP0 725 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 IER5LQ5T953 404 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CYP4A22Q5TCH4 519 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 METTL21CQ5VZV1 264 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GTF2IRD2BQ6EKJ0 949 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ITPRIPL1Q6GPH6 555 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PRR5LQ6MZQ0 368 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 OGFOD2Q6N063 350 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 DENND1BQ6P3S1 775 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 DNAJC24Q6P3W2 148 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 DARS2Q6PI48 645 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms