RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 F5H5T6 163 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 K7ESF4 209 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 GFRA2O00451 464 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 DDX3XO00571 662 aaKnown RBP eCLIP9.55□□□□□ -0.885e-16■■■■□ 24.5
HMGN1-202ENST00000380747 GYPCP04921 128 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 TPM1P09493 284 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 PDGFRAP16234 1089 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 GPD1P21695 349 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 SDC4P31431 198 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 CASP14P31944 242 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 RDXP35241 583 aaKnown RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 GGCXP38435 758 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 KIR2DL1P43626 348 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 PXNP49023 591 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 FNTBP49356 437 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 CXCR3P49682 368 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 RPS24P62847 133 aaKnown RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 ATP11AP98196 1134 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 DMWDQ09019 674 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 MMRN1Q13201 1228 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 EIF4EBP2Q13542 120 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 TRIM14Q14142 442 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 CSRP2Q16527 193 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 CDO1Q16878 200 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 GEN1Q17RS7 908 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 MS4A13Q5J8X5 152 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 EOGTQ5NDL2 527 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 EGFLAMQ63HQ2 1017 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 SDE2Q6IQ49 451 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 PPP1R2P3Q6NXS1 205 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 SYT13Q7L8C5 426 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 ANKS1BQ7Z6G8 1248 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 VPS36Q86VN1 386 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 DNAAF5Q86Y56 855 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 MCOLN2Q8IZK6 566 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 CARNMT1Q8N4J0 409 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 ZNF513Q8N8E2 541 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 IL17RCQ8NAC3 791 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 TXNDC5Q8NBS9 432 aaKnown RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 C3orf20Q8ND61 904 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 SYN2Q92777 582 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 HHIPQ96QV1 700 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 SLC2A11Q9BYW1 496 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
HMGN1-202ENST00000380747 CIPCQ9C0C6 399 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 TKTL2Q9H0I9 626 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 SIK2Q9H0K1 926 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 RBSNQ9H1K0 784 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 WDCPQ9H6R7 721 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 MMP17Q9ULZ9 603 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 SLC27A6Q9Y2P4 619 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 PAXBP1Q9Y5B6 917 aa9.55□□□□□ -0.88
HMGN1-202ENST00000380747 ANKRD62A6NC57 917 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 C2CD4BA6NLJ0 364 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 H0Y626 953 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 SGK1O00141 431 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 AP5Z1O43299 807 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 RTN2O75298 545 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 PAGE1O75459 146 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 PAPSS2O95340 614 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 ADCY5O95622 1261 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 FTLP02792 175 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 SERPING1P05155 500 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 RRM1P23921 792 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 CNR2P34972 360 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 RFC1P35251 1148 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 GSCP56915 257 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 SHC2P98077 582 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 KCNC4Q03721 635 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 SPEM2Q0P670 501 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 MTA1Q13330 715 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 CDH18Q13634 790 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 C15orf59Q2T9L4 293 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 CCDC14Q49A88 953 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 HSF5Q4G112 596 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 BRMS1LQ5PSV4 323 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 RABGAP1LQ5R372 815 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 MPP7Q5T2T1 576 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 HGSNATQ68CP4 663 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 DCUN1D2Q6PH85 259 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 WDR59Q6PJI9 974 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 ARCQ7LC44 396 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 TRMT11Q7Z4G4 463 aaKnown RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 FAM131BQ86XD5 332 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 VSTM4Q8IW00 320 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 MFN1Q8IWA4 741 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 CHPFQ8IZ52 775 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 ZNF557Q8N988 423 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 TSTD1Q8NFU3 115 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 OLIG1Q8TAK6 271 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 UCMAQ8WVF2 138 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 NT5C3BQ969T7 300 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 PGAP3Q96FM1 320 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 RPRD1AQ96P16 312 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-202ENST00000380747 MCEEQ96PE7 176 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 ACOX2Q99424 681 aa9.54□□□□□ -0.88
HMGN1-202ENST00000380747 PRMT1Q99873 361 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms