RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ALLCQ8N6M5 410 aa14.38□□□□□ -0.11
TRIM13-202ENST00000378182 TATDN2Q93075 761 aa14.38□□□□□ -0.11
TRIM13-202ENST00000378182 ZDHHC15Q96MV8 337 aa14.38□□□□□ -0.11
TRIM13-202ENST00000378182 MYLK2Q9H1R3 596 aa14.38□□□□□ -0.11
TRIM13-202ENST00000378182 HEY2Q9UBP5 337 aa14.38□□□□□ -0.11
TRIM13-202ENST00000378182 ADCY10Q96PN6 1610 aa14.38□□□□□ -0.11
TRIM13-202ENST00000378182 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 BUD23O43709 281 aaKnown RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 FAM86B2P0C5J1 330 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 UQCRBP14927 111 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 FXR1P51114 621 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 NUP107P57740 925 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 ITGA9Q13797 1035 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 PDPK2PQ6A1A2 396 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 PSRC1Q6PGN9 363 aaPredicted RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 FBXO39Q8N4B4 442 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 ZNF354BQ96LW1 612 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 TLE6Q9H808 572 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 A1CFQ9NQ94 594 aaKnown RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 KCNQ5Q9NR82 932 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 ZNF232Q9UNY5 417 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 PCCBP05166 539 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 TUFMP49411 452 aaKnown RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 TTC7BQ86TV6 843 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 REPS2Q8NFH8 660 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 RBMXL2O75526 392 aaKnown RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 NPY2RP49146 381 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 OTUD3Q5T2D3 398 aaPredicted RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 REPS1Q96D71 796 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 SLC9A7Q96T83 725 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 HGH1Q9BTY7 390 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 ADAM30Q9UKF2 790 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 PPP2R3BQ9Y5P8 575 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 CNOT3O75175 753 aaKnown RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 VGLL4Q14135 290 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 IQCF2Q8IXL9 164 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 FAM45AQ8TCE6 357 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 BARX2Q9UMQ3 279 aaPredicted RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 RAD54BQ9Y620 910 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 SPATA31E1Q6ZUB1 1445 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 CTPS1P17812 591 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 ABL2P42684 1182 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 EXOSC10Q01780 885 aaKnown RBP14.37□□□□□ -0.11
TRIM13-202ENST00000378182 CNSTQ6PJW8 725 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 IL27RAQ6UWB1 636 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 CATSPERZQ9NTU4 200 aa14.37□□□□□ -0.11
TRIM13-202ENST00000378182 RPL4P36578 427 aaKnown RBP14.36□□□□□ -0.11
TRIM13-202ENST00000378182 SCNN1GP51170 649 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 HSPA14Q0VDF9 509 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 SYT12Q8IV01 421 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 C17orf75Q9HAS0 396 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 DNMT3LQ9UJW3 386 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 STON1Q9Y6Q2 735 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 RNF17Q9BXT8 1623 aaKnown RBP14.36□□□□□ -0.11
TRIM13-202ENST00000378182 NTSP30990 170 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 TLX1P31314 330 aaPredicted RBP14.36□□□□□ -0.11
TRIM13-202ENST00000378182 RHAGQ02094 409 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
TRIM13-202ENST00000378182 DGKZQ13574 1117 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 PPP1R26Q5T8A7 1209 aaPredicted RBP14.36□□□□□ -0.11
TRIM13-202ENST00000378182 TRPM8Q7Z2W7 1104 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 KCNMB4Q86W47 210 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 PROSER1Q86XN7 944 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 SIKE1Q9BRV8 207 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 SEPT3Q9UH03 358 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 SERPINA4P29622 427 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 TAF5Q15542 800 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 OTOP2Q7RTS6 562 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 PROX1Q92786 737 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 PCDH12Q9NPG4 1184 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 CLTCL1P53675 1640 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 MCIDASD6RGH6 385 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 FAM86B1E9PN63 330 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 RASGRP1O95267 797 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 TMEM253P0C7T8 217 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 ITGA3P26006 1051 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 ATP5C1P36542 298 aaKnown RBP14.36□□□□□ -0.11
TRIM13-202ENST00000378182 CRY1Q16526 586 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 PLA2G12BQ9BX93 195 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 TMEM120AQ9BXJ8 343 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 POMKQ9H5K3 350 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 MARCH2Q9P0N8 246 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 C1QTNF3-AMACRE9PGA6 284 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 TP73O15350 636 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 INTS5Q6P9B9 1019 aaKnown RBP14.36□□□□□ -0.11
TRIM13-202ENST00000378182 CRTC3Q6UUV7 619 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 ADGRG2Q8IZP9 1017 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 GPR156Q8NFN8 814 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 DNERQ8NFT8 737 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 TMPRSS4Q9NRS4 437 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 LIMD1Q9UGP4 676 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 SCN2BO60939 215 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 DNTTP04053 509 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 COX7A2P14406 83 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 PSMB9P28065 219 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 POLD2P49005 469 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 ARMCX4Q5H9R4 360 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 FAM45BPQ6NSW5 357 aa14.36□□□□□ -0.11
TRIM13-202ENST00000378182 SLC27A1Q6PCB7 646 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms