RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 CAPN10Q9HC96 672 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 PRSS16Q9NQE7 514 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 SCML1Q9UN30 329 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 NCKAP1Q9Y2A7 1128 aa17.71■□□□□ 0.43
USP11-202ENST00000377078 CEP192Q8TEP8 1941 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 EDDM13A0A1B0GTR0 161 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 A0A1B0GTW7 788 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 TARSL2A2RTX5 802 aaKnown RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 ARHGAP33O14559 1287 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 GFPT2O94808 682 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 CSRP1P21291 193 aaKnown RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 GABRB2P47870 512 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 SULT1E1P49888 294 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 COPB1P53618 953 aaKnown RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 RPS14P62263 151 aaKnown RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 ZNF177Q13360 481 aaPredicted RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 ARID5BQ14865 1188 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 DCAF12L1Q5VU92 463 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 PSAPL1Q6NUJ1 521 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 MMS22LQ6ZRQ5 1243 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 NOP9Q86U38 636 aaKnown RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 FAM124AQ86V42 546 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 CCAR2Q8N163 923 aaKnown RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 NEK11Q8NG66 645 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 GANCQ8TET4 914 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 DNASE2BQ8WZ79 361 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 PRMT1Q99873 361 aaKnown RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 ZDHHC5Q9C0B5 715 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 BTBD1Q9H0C5 482 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 MIR1-1HGQ9H1L0 117 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 GANQ9H2C0 597 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 WDCPQ9H6R7 721 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 INTS6Q9UL03 887 aaKnown RBP17.7■□□□□ 0.42
USP11-202ENST00000377078 ERVW-1Q9UQF0 538 aa17.7■□□□□ 0.42
USP11-202ENST00000377078 PI4KAP42356 2102 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 METTL12A8MUP2 240 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 OPHN1O60890 802 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 PAGE1O75459 146 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 CLDN11O75508 207 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 MMEP08473 750 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 C7P10643 843 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 PDGFRAP16234 1089 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 SOX5P35711 763 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 STAT1P42224 750 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 DEUP1Q05D60 604 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 AUHQ13825 339 aaKnown RBP17.69■□□□□ 0.42
USP11-202ENST00000377078 SYCP1Q15431 976 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 SH3PXD2AQ5TCZ1 1133 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 FBXL22Q6P050 247 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 TRIM72Q6ZMU5 477 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 XYLT1Q86Y38 959 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 DHX40Q8IX18 779 aaKnown RBP17.69■□□□□ 0.42
USP11-202ENST00000377078 SNX19Q92543 992 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 NPY6RQ99463 290 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 RSPH9Q9H1X1 276 aaPredicted RBP17.69■□□□□ 0.42
USP11-202ENST00000377078 SGK2Q9HBY8 427 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 VANGL2Q9ULK5 521 aa17.69■□□□□ 0.42
USP11-202ENST00000377078 MUC22E2RYF6 1773 aaPredicted RBP17.68■□□□□ 0.42
USP11-202ENST00000377078 LGALS16A8MUM7 142 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 GOLGA8SH3BPF8 625 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 SIN3BO75182 1162 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 SEMA4FO95754 770 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 CEACAM1P13688 526 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 MAOBP27338 520 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 CXCR3P49682 368 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 CDR2Q01850 454 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 UBXN1Q04323 297 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 SLC25A52Q3SY17 297 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 NAA35Q5VZE5 725 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 LRRC31Q6UY01 552 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 USP30Q70CQ3 517 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 CIR1Q86X95 450 aaPredicted RBP17.68■□□□□ 0.42
USP11-202ENST00000377078 ZCCHC9Q8N567 271 aaKnown RBP17.68■□□□□ 0.42
USP11-202ENST00000377078 MINDY1Q8N5J2 469 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 CPA5Q8WXQ8 436 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 PGAP3Q96FM1 320 aaPredicted RBP17.68■□□□□ 0.42
USP11-202ENST00000377078 TKTL2Q9H0I9 626 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 SIK2Q9H0K1 926 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 NLRC4Q9NPP4 1024 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 PIGVQ9NUD9 493 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 LIMA1Q9UHB6 759 aaKnown RBP17.68■□□□□ 0.42
USP11-202ENST00000377078 SLC25A13Q9UJS0 675 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 HS3ST4Q9Y661 456 aa17.68■□□□□ 0.42
USP11-202ENST00000377078 BCAT2O15382 392 aaPredicted RBP17.67■□□□□ 0.42
USP11-202ENST00000377078 CDH4P55283 916 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 NOMO3P69849 1222 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 N4BP2L1Q5TBK1 243 aaPredicted RBP17.67■□□□□ 0.42
USP11-202ENST00000377078 APCDD1Q8J025 514 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 NT5C3BQ969T7 300 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 MYO19Q96H55 970 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 MRGPRX3Q96LB0 322 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 OMDQ99983 421 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 PABPC3Q9H361 631 aaKnown RBP17.67■□□□□ 0.42
USP11-202ENST00000377078 ARHGEF38Q9NXL2 777 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 ITIH6Q6UXX5 1313 aa17.67■□□□□ 0.42
USP11-202ENST00000377078 TTC34A8MYJ7 566 aa17.66■□□□□ 0.42
USP11-202ENST00000377078 UPK3BL1B0FP48 263 aa17.66■□□□□ 0.42
USP11-202ENST00000377078 UPK3BL2E5RIL1 263 aa17.66■□□□□ 0.42
USP11-202ENST00000377078 ZNF18P17022 549 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms