RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SALL3Q9BXA9 1300 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 ZNF839A8K0R7 811 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 ZBTB14O43829 449 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 USP12O75317 370 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 PPP2R1BP30154 601 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 PTENP60484 403 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 CYP20A1Q6UW02 462 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 CNBD2Q96M20 576 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 CATSPERZQ9NTU4 200 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 ARHGEF28Q8N1W1 1705 aaKnown RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 KIF1AQ12756 1690 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 TRUB2O95900 331 aaKnown RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 ADRB2P07550 413 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 GP5P40197 560 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 ACAP1Q15027 740 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 SEMA4DQ92854 862 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 TMEM120AQ9BXJ8 343 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 DNALI1O14645 258 aaPredicted RBP13.89□□□□□ -0.19
GPC6-201ENST00000377047 GRK4P32298 578 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 MMRN1Q13201 1228 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 NYAP1Q6ZVC0 841 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 NECAB2Q7Z6G3 386 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 REPS1Q96D71 796 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 KLRG1Q96E93 195 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 DNPEPQ9ULA0 475 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 RAB23Q9ULC3 237 aa13.89□□□□□ -0.19
GPC6-201ENST00000377047 F8VP50 259 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 GRK2P25098 689 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 RBL1P28749 1068 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 SERPINH1P50454 418 aaKnown RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 CASP5P51878 434 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 PPP3CAQ08209 521 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 MRPL28Q13084 256 aaKnown RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 PCBP1Q15365 356 aaKnown RBP eCLIP13.88□□□□□ -0.19
GPC6-201ENST00000377047 AGKQ53H12 422 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 BNC2Q6ZN30 1099 aaPredicted RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 CATSPER2Q96P56 530 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 BBS4Q96RK4 519 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 ARMC7Q9H6L4 198 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 MID1IP1Q9NPA3 183 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 SOHLH2Q9NX45 425 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 DDX3XO00571 662 aaKnown RBP eCLIP13.88□□□□□ -0.193e-8■■■□□ 17.9
GPC6-201ENST00000377047 ATP6V1B2P21281 511 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 KCNMA1Q12791 1236 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 SLC45A4Q5BKX6 768 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 MILR1Q7Z6M3 343 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 USP6NLQ92738 828 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 MTFMTQ96DP5 389 aaKnown RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 SH3GL1Q99961 368 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 ZC4H2Q9NQZ6 224 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 ZSCAN32Q9NX65 697 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 SEC22BO75396 215 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 CD86P42081 329 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 ZCCHC8Q6NZY4 707 aaKnown RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 GPR152Q8TDT2 470 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 C10orf88Q9H8K7 445 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 TMBIM4Q9HC24 238 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 GPSM3Q9Y4H4 160 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 UBDO15205 165 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 TM9SF1O15321 606 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 NUDT14O95848 222 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 PFKPQ01813 784 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 KCTD14Q9BQ13 255 aaPredicted RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 RHBGQ9H310 441 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 AVENQ9NQS1 362 aaPredicted RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 COL3A1P02461 1466 aaPredicted RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 C1QTNF3-AMACRE9PGA6 284 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 DEAF1O75398 565 aaPredicted RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 AMD1P17707 334 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 IRAK1P51617 712 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 NOL9Q5SY16 702 aaKnown RBP13.88□□□□□ -0.19
GPC6-201ENST00000377047 ATAD3BQ5T9A4 648 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 FNDC5Q8NAU1 212 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 CD99L2Q8TCZ2 262 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 CCT7Q99832 543 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 ZFYVE1Q9HBF4 777 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 GIT1Q9Y2X7 761 aa13.88□□□□□ -0.19
GPC6-201ENST00000377047 SNTNA6NMZ2 147 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 PRR23D1E9PI22 279 aaPredicted RBP13.87□□□□□ -0.19
GPC6-201ENST00000377047 B4GALT5O43286 388 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 PRR23D2P0DMB1 279 aaPredicted RBP13.87□□□□□ -0.19
GPC6-201ENST00000377047 PPM1AP35813 382 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 SKIV2L2P42285 1042 aaKnown RBP13.87□□□□□ -0.19
GPC6-201ENST00000377047 SLC1A6P48664 564 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 CRY1Q16526 586 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 DDR2Q16832 855 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 CCDC153Q494R4 210 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 RAET1GQ6H3X3 334 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 EVA1BQ9NVM1 165 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 TMEM51Q9NW97 253 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 HAO1Q9UJM8 370 aa13.87□□□□□ -0.19
GPC6-201ENST00000377047 KCNA3P22001 575 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms