RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 OLIG2Q13516 323 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 SCML4Q8N228 414 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 OR52K1Q8NGK4 314 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 RFWD2Q8NHY2 731 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 GLT1D1Q96MS3 346 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 CREBZFQ9NS37 354 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 TRIM33Q9UPN9 1127 aa20.73■□□□□ 0.91
VSX1-202ENST00000376709 ZBTB24O43167 697 aaPredicted RBP20.72■□□□□ 0.91
VSX1-202ENST00000376709 USP12O75317 370 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 AP2A1O95782 977 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 CKBP12277 381 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 GRIK1P39086 918 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 PLEKHG4Q58EX7 1191 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 RWDD4Q6NW29 188 aaKnown RBP20.72■□□□□ 0.91
VSX1-202ENST00000376709 ASRGL1Q7L266 308 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 DNAAF3Q8N9W5 541 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 MECRQ9BV79 373 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 ZFATQ9P243 1243 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 TXNDC16Q9P2K2 825 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 RPS6KL1Q9Y6S9 549 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 ATP5HO75947 161 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 CRHR1P34998 444 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 SMAD1Q15797 465 aaKnown RBP20.72■□□□□ 0.91
VSX1-202ENST00000376709 ITPRIPL1Q6GPH6 555 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 PACS1Q6VY07 963 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 C4orf50Q6ZRC1 276 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 ZNF598Q86UK7 904 aaKnown RBP20.72■□□□□ 0.91
VSX1-202ENST00000376709 TRIM42Q8IWZ5 723 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 CELF6Q96J87 481 aaKnown RBP20.72■□□□□ 0.91
VSX1-202ENST00000376709 SIK2Q9H0K1 926 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 GBA3Q9H227 469 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 ARHGEF3Q9NR81 526 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 TRHDEQ9UKU6 1024 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 NLRC5Q86WI3 1866 aa20.72■□□□□ 0.91
VSX1-202ENST00000376709 KLF11O14901 512 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 TARSP26639 723 aaKnown RBP20.71■□□□□ 0.91
VSX1-202ENST00000376709 SLC5A3P53794 718 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 ZBTB17Q13105 803 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 NAB1Q13506 487 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 BTBD8Q5XKL5 378 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 GLB1LQ6UWU2 654 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 CES3Q6UWW8 571 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 TIFABQ6ZNK6 161 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 RASSF3Q86WH2 238 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 GORASP1Q9BQQ3 440 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 ABCC13Q9NSE7 274 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 ZFP69BQ9UJL9 534 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 VANGL2Q9ULK5 521 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 PATJQ8NI35 1801 aa20.71■□□□□ 0.91
VSX1-202ENST00000376709 VGLL3A8MV65 326 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 ATP6V1G2O95670 118 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 INHAP05111 366 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 TYMPP19971 482 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 TMPRSS15P98073 1019 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 MBTPS1Q14703 1052 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 TEX44Q53QW1 395 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 MTDHQ86UE4 582 aaKnown RBP20.7■□□□□ 0.91
VSX1-202ENST00000376709 VAT1Q99536 393 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 IL1RAPL1Q9NZN1 696 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 BFARQ9NZS9 450 aa20.7■□□□□ 0.91
VSX1-202ENST00000376709 ERI2A8K979 691 aaKnown RBP20.7■□□□□ 0.9
VSX1-202ENST00000376709 CHUKO15111 745 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 TGDSO95455 350 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 ERVK-10P10266 1014 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 TAF1BQ53T94 588 aaPredicted RBP20.7■□□□□ 0.9
VSX1-202ENST00000376709 SPANXN3Q5MJ09 141 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 ATG16L1Q676U5 607 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 NUDCD3Q8IVD9 361 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 REM2Q8IYK8 340 aaPredicted RBP20.7■□□□□ 0.9
VSX1-202ENST00000376709 CERS2Q96G23 380 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 OSBPL2Q9H1P3 480 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 LRRC40Q9H9A6 602 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 BAIAP2L1Q9UHR4 511 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 STK38LQ9Y2H1 464 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 PSAT1Q9Y617 370 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 SQORQ9Y6N5 450 aa20.7■□□□□ 0.9
VSX1-202ENST00000376709 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.9
VSX1-202ENST00000376709 CCDC195A0A1B0GUA6 201 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 MOXD2PA6NHM9 499 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 ARHGAP42A6NI28 874 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 KRT16P08779 473 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 NFKB1P19838 968 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 CYP2C18P33260 490 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 CD68P34810 354 aaPredicted RBP20.69■□□□□ 0.9
VSX1-202ENST00000376709 ARFIP2P53365 341 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 LHX8Q68G74 356 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 ZNF449Q6P9G9 518 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 TRAF7Q6Q0C0 670 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 BEND5Q7L4P6 421 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 STKLD1Q8NE28 680 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 E2F7Q96AV8 911 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 HAO1Q9UJM8 370 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 PCDHB8Q9UN66 801 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 A0A1W2PQ45 241 aaPredicted RBP20.69■□□□□ 0.9
VSX1-202ENST00000376709 A0A1W2PQY0 241 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 TPP1O14773 563 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 IRAK2O43187 625 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 IL1BP01584 269 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 IGLV3-25P01717 112 aa20.69■□□□□ 0.9
VSX1-202ENST00000376709 ALDOAP04075 364 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms