RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ZNF560Q96MR9 790 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 TMPRSS4Q9NRS4 437 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 SNX15Q9NRS6 342 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 PPM1HQ9ULR3 514 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 HES2Q9Y543 173 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 G3V2L1 256 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 MAP3K13O43283 966 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 AHCYL1O43865 530 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 AP2A1O95782 977 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 ERVK-10P10266 1014 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 GJA5P36382 358 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 LIMK2P53671 638 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 HIC1Q14526 733 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 DUSP28Q4G0W2 176 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 GLRA4Q5JXX5 417 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 C1orf146Q5VVC0 180 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 RFX8Q6ZV50 586 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 OSTM1Q86WC4 334 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 RASSF3Q86WH2 238 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 PPP1R14CQ8TAE6 165 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 SHKBP1Q8TBC3 707 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 NTAN1Q96AB6 310 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 ECSITQ9BQ95 431 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 DLGAP2Q9P1A6 1054 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 MBLAC1A4D2B0 266 aaPredicted RBP10.93□□□□□ -0.66
ABCF1-202ENST00000376545 TMEM114B3SHH9 223 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 C9IYK1 514 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 DDNO94850 711 aaPredicted RBP10.93□□□□□ -0.66
ABCF1-202ENST00000376545 FYNP06241 537 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 DARSP14868 501 aaKnown RBP10.93□□□□□ -0.66
ABCF1-202ENST00000376545 SMPD1P17405 629 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 MX2P20592 715 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 PTPN3P26045 913 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 GARSP41250 739 aaKnown RBP10.93□□□□□ -0.66
ABCF1-202ENST00000376545 COPAP53621 1224 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 GJA9P57773 515 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 SLC25A3Q00325 362 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 DSG1Q02413 1049 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 DCLK2Q8N568 766 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 TOP6BLQ8N6T0 577 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 APPL2Q8NEU8 664 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 PPP4R1Q8TF05 950 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 TNIP3Q96KP6 325 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 FERMT1Q9BQL6 677 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 LRRC40Q9H9A6 602 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 SCOCQ9UIL1 159 aa10.93□□□□□ -0.66
ABCF1-202ENST00000376545 NRCAMQ92823 1304 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 SMIM35A0A1B0GVV1 85 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 UPP2O95045 317 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 MPOP05164 745 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 CPA3P15088 417 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 TYK2P29597 1187 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 TAF6P49848 677 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 SERPINB8P50452 374 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 SOX4Q06945 474 aaPredicted RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 PPIDQ08752 370 aaKnown RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 ADIGQ0VDE8 80 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 CCNIQ14094 377 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 INTS6LQ5JSJ4 861 aaKnown RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 UBXN11Q5T124 520 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 FOXB2Q5VYV0 432 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 METTL21CQ5VZV1 264 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 PDPK2PQ6A1A2 396 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 CATSPER4Q7RTX7 472 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 PLD6Q8N2A8 252 aaKnown RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 RNF169Q8NCN4 708 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 B3GALNT2Q8NCR0 500 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 PHC3Q8NDX5 983 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 GSTCDQ8NEC7 633 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 NDRG1Q92597 394 aaKnown RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 WNT8BQ93098 351 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 PGBD4Q96DM1 585 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 CMTM5Q96DZ9 223 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 CDCA5Q96FF9 252 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 PGAP3Q96FM1 320 aaPredicted RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 TRAPPC9Q96Q05 1148 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 CCDC28BQ9BUN5 200 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 SNX25Q9H3E2 840 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 WDR6Q9NNW5 1121 aaKnown RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 PIH1D1Q9NWS0 290 aaKnown RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 NDE1Q9NXR1 346 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 TBC1D30Q9Y2I9 924 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 RPS6KL1Q9Y6S9 549 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 ERI2A8K979 691 aaKnown RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 MEI4A8MW99 385 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 GABRDO14764 452 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 BEST1O76090 585 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 NPR3P17342 541 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 SPRP35270 261 aaPredicted RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 MLH1P40692 756 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 MXRA7P84157 204 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 IFRD2Q12894 506 aaPredicted RBP10.92□□□□□ -0.66
ABCF1-202ENST00000376545 DGKDQ16760 1214 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 SV2CQ496J9 727 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 DCAF6Q58WW2 860 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 RALGPS1Q5JS13 557 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 SYPL2Q5VXT5 272 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 FSTL4Q6MZW2 842 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 TP53INP2Q8IXH6 220 aa10.92□□□□□ -0.66
ABCF1-202ENST00000376545 TMEM151AQ8N4L1 468 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms