RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CDK5RAP1Q96SZ6 601 aaKnown RBP18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 VPS9D1Q9Y2B5 631 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 PPEF2O14830 753 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 TTLL9Q3SXZ7 439 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 SDE2Q6IQ49 451 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 SNX27Q96L92 541 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 TTPALQ9BTX7 342 aa18.35■□□□□ 0.53
PTPDC1-202ENST00000375360 MAGEB16A2A368 324 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 LMNAP02545 664 aaKnown RBP18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 ITGAVP06756 1048 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 SERPINB5P36952 375 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 ATXN1P54253 815 aaKnown RBP18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 AUHQ13825 339 aaKnown RBP18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 UCMAQ8WVF2 138 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 CMTM5Q96DZ9 223 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 PGM2Q96G03 612 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 NSL1Q96IY1 281 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 SCOCQ9UIL1 159 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 KNL1Q8NG31 2342 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 PGAM1P18669 254 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 UNC5AQ6ZN44 842 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 P2RY11Q96G91 374 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 TWNKQ96RR1 684 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 BRD8Q9H0E9 1235 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 RASSF10A6NK89 507 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 SNAI1O95863 264 aaPredicted RBP18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 SH3PXD2AQ5TCZ1 1133 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 RBM23Q86U06 439 aaKnown RBP18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 PYROXD2Q8N2H3 581 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 RSPH1Q8WYR4 309 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 VAT1Q99536 393 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 TBL1YQ9BQ87 522 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 EMILIN2Q9BXX0 1053 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 DNMT3LQ9UJW3 386 aa18.34■□□□□ 0.53
PTPDC1-202ENST00000375360 TMEM247A6NEH6 219 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 RPL17P18621 184 aaKnown RBP18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 CTNNB1P35222 781 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 DRG2P55039 364 aaKnown RBP18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 MON1AQ86VX9 555 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 SEMA3CQ99985 751 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 POLR1EQ9GZS1 481 aaKnown RBP18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 MAF1Q9H063 256 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 PTPRHQ9HD43 1115 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 SEPT3Q9UH03 358 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 TRPM3Q9HCF6 1732 aaPredicted RBP18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 KPNA3O00505 521 aaPredicted RBP18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 APOA4P06727 396 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 NPY2RP49146 381 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 ACLYP53396 1101 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 HDAC4P56524 1084 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 PABPC1LQ4VXU2 614 aaKnown RBP18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 NEPROQ6NW34 567 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 ICA1LQ8NDH6 482 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 FAM50BQ9Y247 325 aa18.33■□□□□ 0.53
PTPDC1-202ENST00000375360 UBOX5O94941 541 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 TMEM199Q8N511 208 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 FIBCD1Q8N539 461 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 CSPG4P5Q96PW8 444 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 HAUS8Q9BT25 410 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 TRIM15Q9C019 465 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 V9GYQ6 96 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 A0A1W2PQH9 124 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 PAPSS1O43252 624 aaPredicted RBP18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 AARS2Q5JTZ9 985 aaKnown RBP18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 AGGF1Q8N302 714 aaeCLIP18.33■□□□□ 0.524e-12■■■■□ 25.3
PTPDC1-202ENST00000375360 CLEC4CQ8WTT0 213 aa18.33■□□□□ 0.52
PTPDC1-202ENST00000375360 TTC36A6NLP5 189 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 PAGE1O75459 146 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 GUCA1CO95843 209 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 CSH1P0DML2 217 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 CSH2P0DML3 217 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 ASTE1Q2TB18 679 aaPredicted RBP18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 ZNF284Q2VY69 593 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 POM121L1PQ3SYA9 428 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 TTC27Q6P3X3 843 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 GLT6D1Q7Z4J2 308 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 ART4Q93070 314 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 RGS18Q9NS28 235 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 ZNF697Q5TEC3 545 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 ZYG11BQ9C0D3 744 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 UXTQ9UBK9 157 aaPredicted RBP18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 CYP1A1P04798 512 aaPredicted RBP18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 RPA3P35244 121 aaPredicted RBP18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 MTFR1Q15390 333 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 PCYT2Q99447 389 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 CENPKQ9BS16 269 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 RUBCNLQ9H714 662 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 NCKIPSDQ9NZQ3 722 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 SLC4A7Q9Y6M7 1214 aa18.32■□□□□ 0.52
PTPDC1-202ENST00000375360 NUDT2P50583 147 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 FOXR1Q6PIV2 292 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 B3GALT6Q96L58 329 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 CDHR5Q9HBB8 845 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 LGR5O75473 907 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 CNTFP26441 200 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 MZF1P28698 734 aaPredicted RBP18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 SLC5A3P53794 718 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 EML3Q32P44 896 aa18.31■□□□□ 0.52
PTPDC1-202ENST00000375360 GALNTL6Q49A17 601 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms