RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 NPY2RP49146 381 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 RAB27AP51159 221 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 ATXN1P54253 815 aaKnown RBP12.54□□□□□ -0.4
UBR4-203ENST00000375225 MAP3K7CLP57077 242 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 DAOAP59103 153 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 CRYMQ14894 314 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 MAPRE1Q15691 268 aaKnown RBP12.54□□□□□ -0.4
UBR4-203ENST00000375225 CCDC153Q494R4 210 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 DNAL1Q4LDG9 190 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBR4-203ENST00000375225 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
UBR4-203ENST00000375225 PTPRN2Q92932 1015 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 SLC7A6OSQ96CW6 309 aaPredicted RBP12.54□□□□□ -0.4
UBR4-203ENST00000375225 DEFB118Q96PH6 123 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 MYCBPQ99417 103 aaPredicted RBP12.54□□□□□ -0.4
UBR4-203ENST00000375225 DCLRE1BQ9H816 532 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 TRIM33Q9UPN9 1127 aa12.54□□□□□ -0.4
UBR4-203ENST00000375225 SYNJ2BP-COX16A0A087WUM0 186 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 PIAS1O75925 651 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 CBX6O95503 412 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 AP2A1O95782 977 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 LTFP02788 710 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 MPOP05164 745 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 T-ENOLP0DO92 83 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 SKIP12755 728 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 MYL4P12829 197 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 MGAT1P26572 445 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 PSMB4P28070 264 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 SERPINB3P29508 390 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 SERPINB8P50452 374 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 SESN2P58004 480 aaPredicted RBP12.53□□□□□ -0.4
UBR4-203ENST00000375225 OCRLQ01968 901 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 SOX4Q06945 474 aaPredicted RBP12.53□□□□□ -0.4
UBR4-203ENST00000375225 PPIDQ08752 370 aaKnown RBP12.53□□□□□ -0.4
UBR4-203ENST00000375225 BST1Q10588 318 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 BMPR2Q13873 1038 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 TRIM71Q2Q1W2 868 aaKnown RBP12.53□□□□□ -0.4
UBR4-203ENST00000375225 TSNAXIP1Q2TAA8 658 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 CTU1Q7Z7A3 348 aaKnown RBP12.53□□□□□ -0.4
UBR4-203ENST00000375225 LINC00523Q86TU6 105 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 SCML4Q8N228 414 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 PYROXD2Q8N2H3 581 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 MPP5Q8N3R9 675 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 STMN2Q93045 179 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 HDAC11Q96DB2 347 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 TSNARE1Q96NA8 513 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 LGMNQ99538 433 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 LPIN3Q9BQK8 851 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 ULBP1Q9BZM6 244 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 CXCL16Q9H2A7 254 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 PRDM12Q9H4Q4 367 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 GOLGA2P5Q9HBQ8 144 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 SMYD2Q9NRG4 433 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 FAM105AQ9NUU6 356 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 COX16Q9P0S2 106 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 FBXW11Q9UKB1 542 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 OGDHLQ9ULD0 1010 aa12.53□□□□□ -0.4
UBR4-203ENST00000375225 SPECC1L-ADORA2AF8WAN1 911 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 FCHO1O14526 889 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 TIMM44O43615 452 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 SNNO75324 88 aaPredicted RBP12.52□□□□□ -0.4
UBR4-203ENST00000375225 CIB2O75838 187 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 USP1O94782 785 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 KLHL2O95198 593 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 MYCP01106 439 aaPredicted RBP12.52□□□□□ -0.4
UBR4-203ENST00000375225 SERPINE1P05121 402 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 APOA4P06727 396 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 CKBP12277 381 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 NCAM1P13591 858 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 ERCC2P18074 760 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 CD52P31358 61 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 ELF1P32519 619 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 CTC1Q2NKJ3 1217 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 RAB41Q5JT25 222 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 ZNF618Q5T7W0 954 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 NAPEPLDQ6IQ20 393 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 TRMT10BQ6PF06 316 aaKnown RBP12.52□□□□□ -0.4
UBR4-203ENST00000375225 BEND5Q7L4P6 421 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 LCA5Q86VQ0 697 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 ZNF567Q8N184 647 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 ENDOVQ8N8Q3 282 aaKnown RBP12.52□□□□□ -0.4
UBR4-203ENST00000375225 DNAAF3Q8N9W5 541 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.52□□□□□ -0.4
UBR4-203ENST00000375225 FAM13CQ8NE31 585 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 GABPB2Q8TAK5 448 aaPredicted RBP12.52□□□□□ -0.4
UBR4-203ENST00000375225 PTCD3Q96EY7 689 aaKnown RBP12.52□□□□□ -0.4
UBR4-203ENST00000375225 CERS2Q96G23 380 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 RILPQ96NA2 401 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 NUDCD1Q96RS6 583 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 TRPV6Q9H1D0 765 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 GBA3Q9H227 469 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 RNF39Q9H2S5 420 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 WDCPQ9H6R7 721 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 STOML1Q9UBI4 398 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 PADI3Q9ULW8 664 aa12.52□□□□□ -0.4
UBR4-203ENST00000375225 CLDN5O00501 218 aa12.52□□□□□ -0.41
UBR4-203ENST00000375225 PTGESO14684 152 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms