RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SMC1BQ8NDV3 1235 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 MZB1Q8WU39 189 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 RSPH1Q8WYR4 309 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 KCNK16Q96T55 309 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 NDNQ99608 321 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 WDCPQ9H6R7 721 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 FBXO9Q9UK97 447 aaPredicted RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 TTLL3Q9Y4R7 772 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 PCDHA11Q9Y5I1 949 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 DCLK1O15075 740 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 AVILO75366 819 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 DNAJC8O75937 253 aaPredicted RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 FYNP06241 537 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 ALADP13716 330 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 CNTFP26441 200 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 SCTRP47872 440 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 CLCN2P51788 898 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 SH3BGRP55822 239 aaPredicted RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 IFRD2Q12894 506 aaPredicted RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 TRIM71Q2Q1W2 868 aaKnown RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 LRRC8BQ6P9F7 803 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 LVRNQ6Q4G3 990 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 GLB1LQ6UWU2 654 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 CTAGE3PQ8IX95 158 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 BANPQ8N9N5 519 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 P2RY11Q96G91 374 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 SIGLEC10Q96LC7 697 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 GLT1D1Q96MS3 346 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 TSEN34Q9BSV6 310 aaKnown RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 COLEC11Q9BWP8 271 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 VPS11Q9H270 941 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 WDR6Q9NNW5 1121 aaKnown RBP8.43□□□□□ -1.06
UBR4-202ENST00000375224 IGSF9Q9P2J2 1179 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 CACNG4Q9UBN1 327 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 INPP5FQ9Y2H2 1132 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 MAD1L1Q9Y6D9 718 aa8.43□□□□□ -1.06
UBR4-202ENST00000375224 hCG_2014768A0A024R1R8 64 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 SDR42E2A6NKP2 422 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 RNF103O00237 685 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 UPP2O95045 317 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 VAV1P15498 845 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 HTR7P34969 479 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 CXCR3P49682 368 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 PITX1P78337 314 aaPredicted RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 ELF3P78545 371 aaPredicted RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 SLC18A2Q05940 514 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 DMPKQ09013 629 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 SEMA3BQ13214 749 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 NAB1Q13506 487 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 SLC44A4Q53GD3 710 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 RNF43Q68DV7 783 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 PPM1NQ8N819 430 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 URGCPQ8TCY9 931 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ABTB1Q969K4 478 aaPredicted RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 RTP3Q9BQQ7 232 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 MAGEB5Q9BZ81 275 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 RGS18Q9NS28 235 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 KANSL3Q9P2N6 904 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 PCDHB8Q9UN66 801 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 LPXNO60711 386 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ERCC2P18074 760 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 BDNFP23560 247 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 IGFBP6P24592 240 aaPredicted RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 FOXN2P32314 431 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 BRCC3P46736 316 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ACLYP53396 1101 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 COG7P83436 770 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 SYCP2LQ5T4T6 812 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 FAAH2Q6GMR7 532 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 DENND5BQ6ZUT9 1274 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ZNF598Q86UK7 904 aaKnown RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 SPATA2LQ8IUW3 424 aaPredicted RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 CDKL2Q92772 493 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 APOPT1Q96IL0 206 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ZNF570Q96NI8 536 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ZIC5Q96T25 663 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 VAT1Q99536 393 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 LGMNQ99538 433 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 PAAF1Q9BRP4 392 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 PRDM12Q9H4Q4 367 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 SRRDQ9UH36 339 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 TRHDEQ9UKU6 1024 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 GMEB1Q9Y692 573 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ERI2A8K979 691 aaKnown RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 NEK2P51955 445 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ZNF33AQ06730 810 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 SLC1A5Q15758 541 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 RASIP1Q5U651 963 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 FYB2Q5VWT5 728 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 BSPRYQ5W0U4 402 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ITPRIPL1Q6GPH6 555 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 UNC5AQ6ZN44 842 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 NCCRP1Q6ZVX7 275 aaPredicted RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 GPRIN1Q7Z2K8 1008 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 WDR75Q8IWA0 830 aaKnown RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 RNF34Q969K3 372 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 NAF1Q96HR8 494 aaKnown RBP8.42□□□□□ -1.06
UBR4-202ENST00000375224 PPP1R12CQ9BZL4 782 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms