RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 GBF1Q92538 1859 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 I3L4J1 428 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 RFXAPO00287 272 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 BAIAP3O94812 1187 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 PARNO95453 639 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 F9P00740 461 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 MLNP12872 115 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 NEK3P51956 506 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 CACNA2D1P54289 1103 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 SESN2P58004 480 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 TPI1P60174 286 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 ELF3P78545 371 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 SMAD3P84022 425 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 IFRD2Q12894 506 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 DPYSQ14117 519 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 PAFAH1B3Q15102 231 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 SNCBQ16143 134 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 PARP6Q2NL67 630 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 PAN2Q504Q3 1202 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 TRMT10BQ6PF06 316 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 SH2D5Q6ZV89 423 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 PID1Q7Z2X4 250 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 SUGP1Q8IWZ8 645 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 SRPK1Q96SB4 655 aaKnown RBP12.42□□□□□ -0.42
HMGCL-202ENST00000374487 ADAM2Q99965 735 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 SMYD2Q9NRG4 433 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 TMEM51Q9NW97 253 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 FBXW11Q9UKB1 542 aa12.42□□□□□ -0.42
HMGCL-202ENST00000374487 WDR27A2RRH5 827 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 FAM72CH0Y354 149 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 UGT1A9O60656 530 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 CSH1P0DML2 217 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 CSH2P0DML3 217 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 ERCC2P18074 760 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 RAB27AP51159 221 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 BMPR2Q13873 1038 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 GRIN2CQ14957 1233 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 RAB41Q5JT25 222 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 MROH9Q5TGP6 573 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 FAM72AQ5TYM5 149 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 FAM72DQ6L9T8 149 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 LRRC8BQ6P9F7 803 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 MRPL10Q7Z7H8 261 aaKnown RBP12.41□□□□□ -0.42
HMGCL-202ENST00000374487 FAM72BQ86X60 149 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 ZNF276Q8N554 614 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 ZMIZ2Q8NF64 920 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 EDEM1Q92611 657 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 NTAN1Q96AB6 310 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 TIFAQ96CG3 184 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 PGBD4Q96DM1 585 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 ERP27Q96DN0 273 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 ZBED2Q9BTP6 218 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 COLEC11Q9BWP8 271 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 TSSK1BQ9BXA7 367 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 SLC13A1Q9BZW2 595 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 MYLK2Q9H1R3 596 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 WDCPQ9H6R7 721 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 UGT1A7Q9HAW7 530 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 UGT1A10Q9HAW8 530 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 UGT1A8Q9HAW9 530 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 EIF2B3Q9NR50 452 aaKnown RBP12.41□□□□□ -0.42
HMGCL-202ENST00000374487 RRN3Q9NYV6 651 aa12.41□□□□□ -0.42
HMGCL-202ENST00000374487 FAM159BA6NKW6 160 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 C9IYK1 514 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 KCNK1O00180 336 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 DCLK1O15075 740 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 TLL1O43897 1013 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 NQO1P15559 274 aaKnown RBP12.4□□□□□ -0.42
HMGCL-202ENST00000374487 PSMB4P28070 264 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 ETV4P43268 484 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 SERPINB9P50453 376 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 CRADDP78560 199 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 OVGP1Q12889 678 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 CHSY1Q86X52 802 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 CCNJLQ8IV13 435 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 ZNF567Q8N184 647 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 CDKL2Q92772 493 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 RNF34Q969K3 372 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 MYLPFQ96A32 169 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 RHOBTB2Q9BYZ6 727 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 MTIF3Q9H2K0 278 aaKnown RBP12.4□□□□□ -0.42
HMGCL-202ENST00000374487 WDR6Q9NNW5 1121 aaKnown RBP12.4□□□□□ -0.42
HMGCL-202ENST00000374487 TXLNGQ9NUQ3 528 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 TMEM30AQ9NV96 361 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 PIH1D1Q9NWS0 290 aaKnown RBP12.4□□□□□ -0.42
HMGCL-202ENST00000374487 KLHL8Q9P2G9 620 aaPredicted RBP12.4□□□□□ -0.42
HMGCL-202ENST00000374487 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 DCTN4Q9UJW0 460 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 INPP5FQ9Y2H2 1132 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 REV3LO60673 3130 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 EPOPA6NHQ4 379 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 NCAM2O15394 837 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 ZNF623O75123 536 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.42
HMGCL-202ENST00000374487 GJB5O95377 273 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 DHRS4L1P0CG22 281 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 BDNFP23560 247 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 MGAT1P26572 445 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 SERPINB4P48594 390 aa12.4□□□□□ -0.42
HMGCL-202ENST00000374487 KCNJ2P63252 427 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms