RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 IRS2Q9Y4H2 1338 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 PLIN3O60664 434 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 APOEP02649 317 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 GLDCP23378 1020 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 GNL1P36915 607 aaPredicted RBP13.21□□□□□ -0.29
PRPF4-201ENST00000374198 HSD17B4P51659 736 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 HNRNPFP52597 415 aaKnown RBP13.21□□□□□ -0.29
PRPF4-201ENST00000374198 NLRP11P59045 1033 aaKnown RBP13.21□□□□□ -0.29
PRPF4-201ENST00000374198 SNRPFP62306 86 aaKnown RBP13.21□□□□□ -0.29
PRPF4-201ENST00000374198 OGDHQ02218 1023 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 C10orf107Q8IVU9 208 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 ZC3H7AQ8IWR0 971 aaKnown RBP13.21□□□□□ -0.29
PRPF4-201ENST00000374198 GPC2Q8N158 579 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 RP9Q8TA86 221 aaKnown RBP13.21□□□□□ -0.29
PRPF4-201ENST00000374198 MCEEQ96PE7 176 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 CIB1Q99828 191 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 TRPV6Q9H1D0 765 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 WDR41Q9HAD4 459 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 IFT52Q9Y366 437 aa13.21□□□□□ -0.29
PRPF4-201ENST00000374198 RBBP6Q7Z6E9 1792 aaKnown RBP13.21□□□□□ -0.3
PRPF4-201ENST00000374198 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.2□□□□□ -0.3
PRPF4-201ENST00000374198 STX16-NPEPL1H3BU86 382 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 RAD17O75943 681 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 RSL1D1O76021 490 aaKnown RBP13.2□□□□□ -0.3
PRPF4-201ENST00000374198 TOMM70O94826 608 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 ENO3P13929 434 aaPredicted RBP13.2□□□□□ -0.3
PRPF4-201ENST00000374198 SERPINB9P50453 376 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 CBLBQ13191 982 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 MTX3Q5HYI7 312 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 RCN3Q96D15 328 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 TMEM9Q9P0T7 183 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 CHADO15335 359 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 AKAP10O43572 662 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRPF4-201ENST00000374198 RHBDL3P58872 404 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 NME3Q13232 169 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 FAF2Q96CS3 445 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 CNDP1Q96KN2 507 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 AFG3L2Q9Y4W6 797 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 SNX13Q9Y5W8 968 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 NOL3O60936 208 aaKnown RBP13.2□□□□□ -0.3
PRPF4-201ENST00000374198 GLRA3O75311 464 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 GCATO75600 419 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 TCN1P20061 433 aaPredicted RBP13.2□□□□□ -0.3
PRPF4-201ENST00000374198 CCNA2P20248 432 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 GRM5P41594 1212 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 IGBP1P78318 339 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 GTF2BQ00403 316 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 GABPAQ06546 454 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 TIGD2Q4W5G0 525 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 FAM47CQ5HY64 1035 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 FAM209AQ5JX71 171 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 ZNF618Q5T7W0 954 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 WDR78Q5VTH9 848 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 AGAP7PQ5VUJ5 663 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 SLC9A4Q6AI14 798 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 OR52B2Q96RD2 323 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 HERC2P3Q9BVR0 1158 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 CEP44Q9C0F1 390 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 POLR1BQ9H9Y6 1135 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 CDY2AQ9Y6F7 541 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
PRPF4-201ENST00000374198 TNFRSF10AO00220 468 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 MGEA5O60502 916 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 RALBP11234 206 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
PRPF4-201ENST00000374198 SCNN1DP51172 638 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 CXCL9Q07325 125 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 GRSF1Q12849 480 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRPF4-201ENST00000374198 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
PRPF4-201ENST00000374198 FAM117BQ6P1L5 589 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 DCUN1D2Q6PH85 259 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 ZBTB49Q6ZSB9 765 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 FAM156AQ8NDB6 213 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 LXNQ9BS40 222 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 TCF7L2Q9NQB0 619 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 HACL1Q9UJ83 578 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 CARD8Q9Y2G2 431 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 KAT6AQ92794 2004 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 GAS7O60861 476 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 CLPXO76031 633 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 MYO1DO94832 1006 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 BCL10O95999 233 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 GNAO1P09471 354 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 OSBPP22059 807 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 MMP8P22894 467 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 MAP4P27816 1152 aaKnown RBP13.19□□□□□ -0.3
PRPF4-201ENST00000374198 GNA15P30679 374 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 SELENBP1Q13228 472 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 TRMT10BQ6PF06 316 aaKnown RBP13.19□□□□□ -0.3
PRPF4-201ENST00000374198 UNC5AQ6ZN44 842 aa13.19□□□□□ -0.3
PRPF4-201ENST00000374198 PTAR1Q7Z6K3 402 aaPredicted RBP13.19□□□□□ -0.3
PRPF4-201ENST00000374198 PEX5LQ8IYB4 626 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms