RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 NELFEP18615 380 aaKnown RBP15.17■□□□□ 0.02
COL9A2-202ENST00000372748 EDNRBP24530 442 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 CYP2F1P24903 491 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 TMED1Q13445 227 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 MAP1SQ66K74 1059 aaPredicted RBP15.17■□□□□ 0.02
COL9A2-202ENST00000372748 SLC9A4Q6AI14 798 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 ILDR2Q71H61 639 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 RIOX2Q8IUF8 465 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 FBXO16Q8IX29 292 aaPredicted RBP15.17■□□□□ 0.02
COL9A2-202ENST00000372748 HACE1Q8IYU2 909 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 CPB2Q96IY4 423 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 SPATA33Q96N06 139 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 STK39Q9UEW8 545 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 FZD9O00144 591 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 MYL4P12829 197 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 CYP3A5P20815 502 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 PROZP22891 400 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 CNTFP26441 200 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 SLC5A2P31639 672 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 MLH1P40692 756 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 MS4A2Q01362 244 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 PDK2Q15119 407 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 CYTH1Q15438 398 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 FSCBQ5H9T9 825 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 SH2D4BQ5SQS7 431 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 BHLHE22Q8NFJ8 381 aaPredicted RBP15.16■□□□□ 0.02
COL9A2-202ENST00000372748 CDKL2Q92772 493 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 FAM167AQ96KS9 214 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 RTKNQ9BST9 563 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 TXNDC16Q9P2K2 825 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 MAGEB3O15480 346 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 TNFAIP8O95379 198 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 ALOX15P16050 662 aaPredicted RBP15.16■□□□□ 0.02
COL9A2-202ENST00000372748 CCR10P46092 362 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 HARS2P49590 506 aaKnown RBP15.16■□□□□ 0.02
COL9A2-202ENST00000372748 COG7P83436 770 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 NIPAL4Q0D2K0 466 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 EPGNQ6UW88 154 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 SCUBE3Q8IX30 993 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 FAM156AQ8NDB6 213 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 ACMSDQ8TDX5 336 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 PKP2Q99959 881 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 FZD8Q9H461 694 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 DHX35Q9H5Z1 703 aaKnown RBP15.16■□□□□ 0.02
COL9A2-202ENST00000372748 LIN28AQ9H9Z2 209 aaKnown RBP15.16■□□□□ 0.02
COL9A2-202ENST00000372748 SSC5DA1L4H1 1573 aa15.16■□□□□ 0.02
COL9A2-202ENST00000372748 STRNO43815 780 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 CILPO75339 1184 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 STAG3L1P0CL83 205 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 ENO3P13929 434 aaPredicted RBP15.15■□□□□ 0.02
COL9A2-202ENST00000372748 POLR2AP24928 1970 aaKnown RBP15.15■□□□□ 0.02
COL9A2-202ENST00000372748 EPHA3P29320 983 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 OLIG2Q13516 323 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 DLG2Q15700 870 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 BOLA3Q53S33 107 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 STXBP5Q5T5C0 1151 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 CDKL3Q8IVW4 592 aaPredicted RBP15.15■□□□□ 0.02
COL9A2-202ENST00000372748 DSELQ8IZU8 1212 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 KLHL23Q8NBE8 558 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 SNRNP27Q8WVK2 155 aaKnown RBP15.15■□□□□ 0.02
COL9A2-202ENST00000372748 MARK4Q96L34 752 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 MRPS26Q9BYN8 205 aaKnown RBP15.15■□□□□ 0.02
COL9A2-202ENST00000372748 BCO2Q9BYV7 579 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 CDH19Q9H159 772 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 C2orf40Q9H1Z8 148 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 TCF7L2Q9NQB0 619 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 MAGED2Q9UNF1 606 aaPredicted RBP15.15■□□□□ 0.02
COL9A2-202ENST00000372748 IGKV6-21A0A0C4DH24 114 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 CHRNGP07510 517 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 TGFB3P10600 412 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 TPSB2P20231 275 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 MBTD1Q05BQ5 628 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 ADGRE1Q14246 886 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 TPSAB1Q15661 275 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 NRF1Q16656 503 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 HEATR6Q6AI08 1181 aaKnown RBP15.15■□□□□ 0.02
COL9A2-202ENST00000372748 RCN3Q96D15 328 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 LGMNQ99538 433 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 CAB39LQ9H9S4 337 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 RIMS3Q9UJD0 308 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 TSPAN16Q9UKR8 245 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 RAB26Q9ULW5 256 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 DMTF1Q9Y222 760 aa15.15■□□□□ 0.02
COL9A2-202ENST00000372748 GCATO75600 419 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 FAM58BPP0C7Q3 252 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 PIK3R1P27986 724 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 RPL26P61254 145 aaKnown RBP15.14■□□□□ 0.01
COL9A2-202ENST00000372748 CBLBQ13191 982 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 DBN1Q16643 649 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 CELF3Q5SZQ8 465 aaKnown RBP15.14■□□□□ 0.01
COL9A2-202ENST00000372748 GJC2Q5T442 439 aaPredicted RBP15.14■□□□□ 0.01
COL9A2-202ENST00000372748 TMEM198Q66K66 360 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 KLC3Q6P597 504 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 PTAR1Q7Z6K3 402 aaPredicted RBP15.14■□□□□ 0.01
COL9A2-202ENST00000372748 TDRD5Q8NAT2 981 aaKnown RBP15.14■□□□□ 0.01
COL9A2-202ENST00000372748 ZFRQ96KR1 1074 aaKnown RBP15.14■□□□□ 0.01
COL9A2-202ENST00000372748 B3GNT5Q9BYG0 378 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 FAM96AQ9H5X1 160 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 PDGFCQ9NRA1 345 aa15.14■□□□□ 0.01
COL9A2-202ENST00000372748 SNX15Q9NRS6 342 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms