RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 PMS2CLQ68D20 193 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 PPP1R2P3Q6NXS1 205 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 CIR1Q86X95 450 aaPredicted RBP20.65■□□□□ 0.9
TMEM53-205ENST00000372244 KIAA2013Q8IYS2 634 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 KDM1BQ8NB78 822 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 IQCDQ96DY2 449 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 ERLEC1Q96DZ1 483 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 MYO19Q96H55 970 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 RAB6CQ9H0N0 254 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 TSPY26PQ9H489 355 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 TMPRSS4Q9NRS4 437 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 CAPN11Q9UMQ6 739 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 TBC1D30Q9Y2I9 924 aa20.65■□□□□ 0.9
TMEM53-205ENST00000372244 IGLV3-10A0A075B6K4 115 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 ZNF217O75362 1048 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 CLDN11O75508 207 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 EPN2O95208 641 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 ASLP04424 464 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 EPHX1P07099 455 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 COPAP53621 1224 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 ARID5BQ14865 1188 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 C15orf59Q2T9L4 293 aaPredicted RBP20.64■□□□□ 0.89
TMEM53-205ENST00000372244 FNDC3BQ53EP0 1204 aaKnown RBP20.64■□□□□ 0.89
TMEM53-205ENST00000372244 SPDYCQ5MJ68 293 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 CXorf57Q6NSI4 855 aaKnown RBP20.64■□□□□ 0.89
TMEM53-205ENST00000372244 STRADAQ7RTN6 431 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 FAM131BQ86XD5 332 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 TMPRSS6Q8IU80 811 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 APCDD1Q8J025 514 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 ALG14Q96F25 216 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 MRGPRX3Q96LB0 322 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 SLC6A17Q9H1V8 727 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 PCDHGA5Q9Y5G8 931 aa20.64■□□□□ 0.89
TMEM53-205ENST00000372244 DDX3XO00571 662 aaKnown RBP eCLIP20.63■□□□□ 0.893e-7■■■□□ 18.6
TMEM53-205ENST00000372244 SKILP12757 684 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 HLA-EP13747 358 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 ADRA1BP35368 520 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 GGCXP38435 758 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 CDH4P55283 916 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 OXCT1P55809 520 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 KLHL30Q0D2K2 578 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 SPEM2Q0P670 501 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 HGSNATQ68CP4 663 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 SELENOOQ9BVL4 669 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 PRDM16Q9HAZ2 1276 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 OR51B4Q9Y5P0 310 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 SNX10Q9Y5X0 201 aa20.63■□□□□ 0.89
TMEM53-205ENST00000372244 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 CNTN5O94779 1100 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 MOCS3O95396 460 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 RRM1P23921 792 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 HDAC4P56524 1084 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 RPL7AP62424 266 aaKnown RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ZBED6P86452 979 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ZNF177Q13360 481 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 CSRP2Q16527 193 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 PLA2G2CQ5R387 149 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 OR52K2Q8NGK3 314 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 SPACA7Q96KW9 195 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 FEM1AQ9BSK4 669 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 XPO4Q9C0E2 1151 aaKnown RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ARRDC1-AS1Q9H2J1 176 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 PRSS16Q9NQE7 514 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ITM2CQ9NQX7 267 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 SEMA4GQ9NTN9 838 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 SUN2Q9UH99 717 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ERVW-1Q9UQF0 538 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 BZW2Q9Y6E2 419 aaKnown RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 DMXL1Q9Y485 3027 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 IGHV1OR15-9A0A0B4J2B8 117 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 FTLP02792 175 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 SRPRAP08240 638 aaKnown RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 MZF1P28698 734 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 CTSOP43234 321 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ZNF143P52747 638 aaPredicted RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ECT2LQ008S8 904 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 MAMLD1Q13495 774 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ALFQ53S48 1182 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 PLEKHA7Q6IQ23 1121 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 DNAJC24Q6P3W2 148 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 LRRC31Q6UY01 552 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ZNF366Q8N895 744 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 PPP1R9BQ96SB3 815 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 OSBPL2Q9H1P3 480 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 USP36Q9P275 1121 aaKnown RBP20.62■□□□□ 0.89
TMEM53-205ENST00000372244 SLCO3A1Q9UIG8 710 aa20.62■□□□□ 0.89
TMEM53-205ENST00000372244 ITIH6Q6UXX5 1313 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 CKAP5Q14008 2032 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 BCLAF3A2AJT9 711 aaKnown RBP20.61■□□□□ 0.89
TMEM53-205ENST00000372244 E9PAM4 449 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 MAP3K13O43283 966 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 GYPCP04921 128 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 GPD1P21695 349 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 VASPP50552 380 aaPredicted RBP20.61■□□□□ 0.89
TMEM53-205ENST00000372244 NRG1Q02297 640 aaPredicted RBP20.61■□□□□ 0.89
TMEM53-205ENST00000372244 SULT2A1Q06520 285 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 CDO1Q16878 200 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 SLC36A4Q6YBV0 504 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 LPCAT2Q7L5N7 544 aa20.61■□□□□ 0.89
TMEM53-205ENST00000372244 OR2T3Q8NH03 318 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms