RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 OR52K1Q8NGK4 314 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 SHKBP1Q8TBC3 707 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 TNIP3Q96KP6 325 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 AGAP3Q96P47 875 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 PGLYRP2Q96PD5 576 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 KLK14Q9P0G3 267 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 KLHL8Q9P2G9 620 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-202ENST00000372237 STAP1Q9ULZ2 295 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 SF3B1O75533 1304 aaKnown RBP eCLIP19.6■□□□□ 0.73
TMEM53-202ENST00000372237 RBM47A0AV96 593 aaKnown RBP19.6■□□□□ 0.73
TMEM53-202ENST00000372237 KCNK1O00180 336 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 EEF2KO00418 725 aaKnown RBP19.6■□□□□ 0.73
TMEM53-202ENST00000372237 NCF2P19878 526 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-202ENST00000372237 NOS2P35228 1153 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 CACNA2D1P54289 1103 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 RNF220Q5VTB9 566 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 OTUD1Q5VV17 481 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-202ENST00000372237 DCLK2Q8N568 766 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 FCRL3Q96P31 734 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-202ENST00000372237 TSC22D3Q99576 134 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 SHCBP1LQ9BZQ2 653 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 LRRC40Q9H9A6 602 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 GDAP2Q9NXN4 497 aa19.6■□□□□ 0.73
TMEM53-202ENST00000372237 SMIM28A0A1B0GU29 152 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 ALOX15P16050 662 aaPredicted RBP19.59■□□□□ 0.73
TMEM53-202ENST00000372237 CRABP2P29373 138 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 SPRP35270 261 aaPredicted RBP19.59■□□□□ 0.73
TMEM53-202ENST00000372237 HARS2P49590 506 aaKnown RBP19.59■□□□□ 0.73
TMEM53-202ENST00000372237 EPHB1P54762 984 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 PAFAH1B3Q15102 231 aaKnown RBP19.59■□□□□ 0.73
TMEM53-202ENST00000372237 AAGABQ6PD74 315 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 TP53INP2Q8IXH6 220 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 TNS4Q8IZW8 715 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 ZNF669Q96BR6 464 aaPredicted RBP19.59■□□□□ 0.73
TMEM53-202ENST00000372237 CMTM5Q96DZ9 223 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 RBBP8Q99708 897 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 ECSITQ9BQ95 431 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 GOLGA2P5Q9HBQ8 144 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 DDX43Q9NXZ2 648 aaKnown RBP19.59■□□□□ 0.73
TMEM53-202ENST00000372237 ASB3Q9Y575 518 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 ZNF195O14628 629 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 ADCY6O43306 1168 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 HUS1O60921 280 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 USP12O75317 370 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 MMP3P08254 477 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 PNPLA4P41247 253 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 TAF6P49848 677 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 B3GALNT2Q8NCR0 500 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 ZNF483Q8TF39 744 aaPredicted RBP19.59■□□□□ 0.73
TMEM53-202ENST00000372237 MS4A4AQ96JQ5 239 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 NPY6RQ99463 290 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 DUSP16Q9BY84 665 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 CYP4F11Q9HBI6 524 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 S100A14Q9HCY8 104 aa19.59■□□□□ 0.73
TMEM53-202ENST00000372237 SPATS2LQ9NUQ6 558 aaKnown RBP19.59■□□□□ 0.73
TMEM53-202ENST00000372237 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.58■□□□□ 0.73
TMEM53-202ENST00000372237 MAP3K13O43283 966 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 GPR32O75388 356 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 SERPINB8P50452 374 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 CDK7P50613 346 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 GTF2A2P52657 109 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 DEUP1Q05D60 604 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 STRA8Q7Z7C7 330 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 DNAAF3Q8N9W5 541 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.58■□□□□ 0.73
TMEM53-202ENST00000372237 GPRC5AQ8NFJ5 357 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 PYDC1Q8WXC3 89 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 NT5C3BQ969T7 300 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 NR1H4Q96RI1 486 aaPredicted RBP19.58■□□□□ 0.73
TMEM53-202ENST00000372237 VANGL2Q9ULK5 521 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 SCN4AP35499 1836 aa19.58■□□□□ 0.73
TMEM53-202ENST00000372237 LOC100653049A0A140TA62 436 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 UNCXA6NJT0 531 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 CCNT2O60583 730 aaKnown RBP19.58■□□□□ 0.72
TMEM53-202ENST00000372237 KRT34O76011 436 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 UBTFL6P0CB48 400 aaPredicted RBP19.58■□□□□ 0.72
TMEM53-202ENST00000372237 NDUFV1P49821 464 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 CCNA1P78396 465 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 CDC16Q13042 620 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 DPYSQ14117 519 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 DGKDQ16760 1214 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 CFAP157Q5JU67 520 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 SYPL2Q5VXT5 272 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 FSTL4Q6MZW2 842 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 PLD6Q8N2A8 252 aaKnown RBP19.58■□□□□ 0.72
TMEM53-202ENST00000372237 KATNBL1Q9H079 304 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 LRRC4Q9HBW1 653 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 BFARQ9NZS9 450 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 ADAM28Q9UKQ2 775 aa19.58■□□□□ 0.72
TMEM53-202ENST00000372237 PDHXO00330 501 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 CLDN5O00501 218 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 DCLK1O15075 740 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 XPOTO43592 962 aaKnown RBP19.57■□□□□ 0.72
TMEM53-202ENST00000372237 BEST1O76090 585 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 LIMK2P53671 638 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 USP4Q13107 963 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 SV2CQ496J9 727 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 SLC26A7Q8TE54 656 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 WNT8BQ93098 351 aa19.57■□□□□ 0.72
TMEM53-202ENST00000372237 CCDC124Q96CT7 223 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms