RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 OR10G6Q8NH81 332 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 PPTC7Q8NI37 304 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 HTR3CQ8WXA8 447 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 MYLPFQ96A32 169 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 TBCBQ99426 244 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 SCAMP1O15126 338 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 TEX28O15482 410 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 MMP3P08254 477 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 CYP2A7P20853 494 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 RRM2P31350 389 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 NUDT2P50583 147 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 P3H2Q8IVL5 708 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 SUSD6Q92537 303 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 ERP27Q96DN0 273 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 KCNK16Q96T55 309 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 PAFAH2Q99487 392 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 RMND5AQ9H871 391 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 MRGBPQ9NV56 204 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 CDH9Q9ULB4 789 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 SOX13Q9UN79 622 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 SLIT3O75094 1523 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 USP2O75604 605 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-202ENST00000372216 EVX2Q03828 476 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 NAT16Q8N8M0 369 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 SIK3Q9Y2K2 1263 aa9.99□□□□□ -0.81
COL4A6-202ENST00000372216 MTA2O94776 668 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 OR6A2O95222 327 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 CALCAP01258 141 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ATP5BP06576 529 aaKnown RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ADRB2P07550 413 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 NR2C2P49116 596 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 CCNG1P51959 295 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ITGA9Q13797 1035 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 CNGA2Q16280 664 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 UGCGQ16739 394 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 NECAB2Q7Z6G3 386 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 HAS1Q92839 578 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 SKA1Q96BD8 255 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 CCT8L2Q96SF2 557 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 RHOBTB2Q9BYZ6 727 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 SLC27A5Q9Y2P5 690 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 FAM25AB3EWG3 89 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 FAM25CB3EWG5 89 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 FAM25GB3EWG6 89 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 GRK4P32298 578 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 RUNX1T1Q06455 604 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 CDH17Q12864 832 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 OVGP1Q12889 678 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 MPP3Q13368 585 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 PCBP1Q15365 356 aaKnown RBP eCLIP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 DGKKQ5KSL6 1271 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 HECTD3Q5T447 861 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 HEATR4Q86WZ0 1026 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 LZTR1Q8N653 840 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 MDM1Q8TC05 714 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 SEC16BQ96JE7 1060 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 DUSP9Q99956 384 aaKnown RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 KLHL20Q9Y2M5 609 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 MRC1P22897 1456 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 MAGEB16A2A368 324 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 UBTFL6P0CB48 400 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 RARGP13631 454 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 TGM3Q08188 693 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ST3GAL1Q11201 340 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 RAP1GAP2Q684P5 730 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 TATDN1Q6P1N9 297 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 SLC35C1Q96A29 364 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 C18orf25Q96B23 403 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 MRPS23Q9Y3D9 190 aaKnown RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ATP6V1B2P21281 511 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 CNTFP26441 200 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 MGAT1P26572 445 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 AASDHQ4L235 1098 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 DENND1CQ8IV53 801 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ACTL9Q8TC94 416 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 VCPIP1Q96JH7 1222 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 FRMD6Q96NE9 622 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 CDT1Q9H211 546 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ELL3Q9HB65 397 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 MRPL39Q9NYK5 338 aaKnown RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 YDJCA8MPS7 323 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 RBP1P09455 135 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 NPR3P17342 541 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 MMP13P45452 471 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ANXA11P50995 505 aaKnown RBP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 PRKAG1P54619 331 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 SEC13P55735 322 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 FAM183BPQ6ZVS7 135 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 UNC93AQ86WB7 457 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 COLGALT2Q8IYK4 626 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 TMEM159Q96B96 161 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 PPP1R16AQ96I34 528 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 PRRG4Q9BZD6 226 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 HIPK3Q9H422 1215 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 TRHDEQ9UKU6 1024 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 EIF3HO15372 352 aaKnown RBP eCLIP9.98□□□□□ -0.81
COL4A6-202ENST00000372216 OR56A5P0C7T3 313 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 ITGAXP20702 1163 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 PSMA3P25788 255 aa9.98□□□□□ -0.81
COL4A6-202ENST00000372216 PTPN3P26045 913 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms