RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 EIF3BP55884 814 aaKnown RBP27■■□□□ 1.91
ATPAF1-202ENST00000371937 ARL4CP56559 192 aa27■■□□□ 1.91
ATPAF1-202ENST00000371937 HIF1AQ16665 826 aa27■■□□□ 1.91
ATPAF1-202ENST00000371937 SPRED2Q7Z698 418 aa27■■□□□ 1.91
ATPAF1-202ENST00000371937 ARHGAP12Q8IWW6 846 aa27■■□□□ 1.91
ATPAF1-202ENST00000371937 CCDC13Q8IYE1 715 aa27■■□□□ 1.91
ATPAF1-202ENST00000371937 MRPS31Q92665 395 aaKnown RBP27■■□□□ 1.91
ATPAF1-202ENST00000371937 RPRD1AQ96P16 312 aaPredicted RBP27■■□□□ 1.91
ATPAF1-202ENST00000371937 TSGA13Q96PP4 275 aa27■■□□□ 1.91
ATPAF1-202ENST00000371937 FRMD8Q9BZ67 464 aaPredicted RBP27■■□□□ 1.91
ATPAF1-202ENST00000371937 ETNK1Q9HBU6 452 aa27■■□□□ 1.91
ATPAF1-202ENST00000371937 F5H5T6 163 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 RIPK2O43353 540 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 STC2O76061 302 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 NUDT17P0C025 328 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 TACR2P21452 398 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 FDFT1P37268 417 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 ERVK-21P61565 698 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 WASHC5Q12768 1159 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 CAMK1Q14012 370 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 AFMIDQ63HM1 303 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 UMODL1-AS1Q8N2C9 162 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 EXOC4Q96A65 974 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 PKNOX2Q96KN3 472 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 VAT1Q99536 393 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 EPB41L4BQ9H329 900 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 RETREG1Q9H6L5 497 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 TRPC7Q9HCX4 862 aa26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 DNAJC17Q9NVM6 304 aaKnown RBP26.99■■□□□ 1.91
ATPAF1-202ENST00000371937 H0YGN5 161 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 DFFAO00273 331 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 MBL2P11226 248 aaPredicted RBP26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 CCNCP24863 283 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 CDC25CP30307 473 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 NDST2P52849 883 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 NADSYN1Q6IA69 706 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 PDIK1LQ8N165 341 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 ATPAF2Q8N5M1 289 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 GCNAQ96QF7 691 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 SH3GL2Q99962 352 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 LRRC3Q9BY71 257 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 NFS1Q9Y697 457 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 ANAPC1Q9H1A4 1944 aa26.98■■□□□ 1.91
ATPAF1-202ENST00000371937 GOLGA8MH3BSY2 632 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 KCNK1O00180 336 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 EIF3HO15372 352 aaKnown RBP eCLIP26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 TMEM63AO94886 807 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 METTL18O95568 372 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 TTC4O95801 387 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 MAGEA4P43358 317 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 SLC29A2Q14542 456 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 TMC8Q8IU68 726 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 DENND1CQ8IV53 801 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 IGSF8Q969P0 613 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 SLC39A8Q9C0K1 460 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 SAYSD1Q9NPB0 183 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 ASAH2Q9NR71 780 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 GKN1Q9NS71 199 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 TRHDEQ9UKU6 1024 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 TCRBV7S3A2A0A539 114 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 OLFM2O95897 454 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 SYF2O95926 243 aaKnown RBP26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 HDCP19113 662 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 CORO1AP31146 461 aaKnown RBP26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 IRS1P35568 1242 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 IFFO1Q0D2I5 559 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 C5orf22Q49AR2 442 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 GAREM2Q75VX8 874 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 ZNF567Q8N184 647 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 ZBTB9Q96C00 473 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 NDFIP2Q9NV92 336 aa26.97■■□□□ 1.91
ATPAF1-202ENST00000371937 GOLGA6L7A0A1B0GV03 622 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 E7EVH7 732 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 H3BNC9 293 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 APRTP07741 180 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 PTPN3P26045 913 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 GPM6BQ13491 265 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 SEMA5AQ13591 1074 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 PARP6Q2NL67 630 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 TXNDC8Q6A555 127 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 PID1Q7Z2X4 250 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 TFAP2DQ7Z6R9 452 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 HS6ST3Q8IZP7 471 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 NUP205Q92621 2012 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 TTC25Q96NG3 672 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 DDX50Q9BQ39 737 aaKnown RBP26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 MAN1C1Q9NR34 630 aa26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 KLHL8Q9P2G9 620 aaPredicted RBP26.96■■□□□ 1.91
ATPAF1-202ENST00000371937 CCDC85CA6NKD9 419 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 H3BQF6 201 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 ALOX15BO15296 676 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 CNTN5O94779 1100 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 FGF19O95750 216 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 TPSB2P20231 275 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 TPSAB1Q15661 275 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 ALFQ53S48 1182 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 FAM133BQ5BKY9 247 aaKnown RBP26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 CEP85LQ5SZL2 805 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 FAXCQ5TGI0 409 aa26.95■■□□□ 1.91
ATPAF1-202ENST00000371937 TIGD7Q6NT04 549 aaPredicted RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms