RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 DCLRE1BQ9H816 532 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 PRDM16Q9HAZ2 1276 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 DDIT4Q9NX09 232 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 HAO1Q9UJM8 370 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 DSEQ9UL01 958 aa13.17□□□□□ -0.3
GPC3-201ENST00000370818 SF3B1O75533 1304 aaKnown RBP eCLIP13.16□□□□□ -0.3
GPC3-201ENST00000370818 EEF2KO00418 725 aaKnown RBP13.16□□□□□ -0.3
GPC3-201ENST00000370818 ASMTLO95671 621 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 PENKP01210 267 aaPredicted RBP13.16□□□□□ -0.3
GPC3-201ENST00000370818 STX2P32856 288 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 SLC18A1P54219 525 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 YWHAGP61981 247 aaKnown RBP eCLIP13.16□□□□□ -0.3
GPC3-201ENST00000370818 SEMA5AQ13591 1074 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
GPC3-201ENST00000370818 OVOS1Q6IE37 1185 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 DCLRE1AQ6PJP8 1040 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
GPC3-201ENST00000370818 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 UROC1Q96N76 676 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 SMC6Q96SB8 1091 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
GPC3-201ENST00000370818 RGS18Q9NS28 235 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 GALNT8Q9NY28 637 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 A0A0A0MRY4 1105 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 T-ENOLP0DO92 83 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 KRT4P19013 534 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 TPSB2P20231 275 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 TARSP26639 723 aaKnown RBP13.16□□□□□ -0.3
GPC3-201ENST00000370818 FOXN2P32314 431 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 RPA3P35244 121 aaPredicted RBP13.16□□□□□ -0.3
GPC3-201ENST00000370818 VHLP40337 213 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 GRIA1P42261 906 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 AIF1P55008 147 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 MTFR1Q15390 333 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 TPSAB1Q15661 275 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 NCSTNQ92542 709 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 P2RY11Q96G91 374 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 CAPNS2Q96L46 248 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 MAGEB18Q96M61 343 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 GLT1D1Q96MS3 346 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 GRID1Q9ULK0 1009 aa13.16□□□□□ -0.3
GPC3-201ENST00000370818 SMG5Q9UPR3 1016 aaKnown RBP13.16□□□□□ -0.3
GPC3-201ENST00000370818 SPAG6O75602 509 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 DDHD2O94830 711 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 SERPINB4P48594 390 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 OCRLQ01968 901 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 CLLU1OSQ5K130 101 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 BSPRYQ5W0U4 402 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 LHX8Q68G74 356 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 SLC44A1Q8WWI5 657 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 CFAP36Q96G28 342 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 SIGLEC10Q96LC7 697 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 TGS1Q96RS0 853 aaKnown RBP13.15□□□□□ -0.3
GPC3-201ENST00000370818 PRDM12Q9H4Q4 367 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 PNPLA8Q9NP80 782 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 STOML1Q9UBI4 398 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 TTLL3Q9Y4R7 772 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.3
GPC3-201ENST00000370818 MAGEA13PA6NCF6 341 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 MOXD2PA6NHM9 499 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 ERCC2P18074 760 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 EPHB2P29323 1055 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 GLUD2P49448 558 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 AP1B1Q10567 949 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 WASHC5Q12768 1159 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 KHDC1Q4VXA5 237 aaKnown RBP13.15□□□□□ -0.3
GPC3-201ENST00000370818 ACBD5Q5T8D3 534 aaPredicted RBP13.15□□□□□ -0.3
GPC3-201ENST00000370818 MPP5Q8N3R9 675 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 SCG3Q8WXD2 468 aaKnown RBP13.15□□□□□ -0.3
GPC3-201ENST00000370818 IRGQQ8WZA9 623 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 ERP27Q96DN0 273 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 GBP5Q96PP8 586 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 TRIM56Q9BRZ2 755 aaKnown RBP13.15□□□□□ -0.3
GPC3-201ENST00000370818 RRN3Q9NYV6 651 aa13.15□□□□□ -0.3
GPC3-201ENST00000370818 ZC3H7BQ9UGR2 993 aaKnown RBP13.15□□□□□ -0.3
GPC3-201ENST00000370818 F5H423 210 aaPredicted RBP13.14□□□□□ -0.31
GPC3-201ENST00000370818 RNF103O00237 685 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 TRPA1O75762 1119 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 TAC1P20366 129 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 PAX3P23760 479 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 CXCR3P49682 368 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 DSC1Q08554 894 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 PDK1Q15118 436 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 SLC1A5Q15758 541 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 CNPY1Q3B7I2 92 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 SNX30Q5VWJ9 437 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 SLC24A5Q71RS6 500 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 SLC43A3Q8NBI5 491 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 NRG4Q8WWG1 115 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 LRRC39Q96DD0 335 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 CEP41Q9BYV8 373 aa13.14□□□□□ -0.31
GPC3-201ENST00000370818 SSU72Q9NP77 194 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms