RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 METTL7BQ6UX53 244 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 CLNKQ7Z7G1 428 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 F5H5T6 163 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 SYNCRIPO60506 623 aaKnown RBP17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ALDH1A1P00352 501 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ABCG1P45844 678 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ADIGQ0VDE8 80 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ZNF618Q5T7W0 954 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 MARC1Q5VT66 337 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ECHDC2Q86YB7 292 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ELOVL6Q9H5J4 265 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 DDX4Q9NQI0 724 aaKnown RBP17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 ANAPC2Q9UJX6 822 aa17.47■□□□□ 0.39
PTP4A1-201ENST00000370651 hCG_1818297A0A087WSY0 165 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 BIRC5O15392 142 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 GSC2O15499 205 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 PSMD10O75832 226 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 FOLH1Q04609 750 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 FUT2Q10981 343 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 ITFG1Q8TB96 612 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 FAM163AQ96GL9 167 aaPredicted RBP17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 ACTR8Q9H981 624 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 CDHR5Q9HBB8 845 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 KRT84Q9NSB2 600 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 STK39Q9UEW8 545 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 KLHL3Q9UH77 587 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 A0A0A0MRY4 1105 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 DDX3YO15523 660 aaKnown RBP17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 MFN2O95140 757 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 MLNP12872 115 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 VPS72Q15906 364 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 TDRD10Q5VZ19 366 aaKnown RBP17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 DEFB106AQ8N104 65 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 FITM2Q8N6M3 262 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 UTP15Q8TED0 518 aaKnown RBP17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 SPATA13Q96N96 652 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 DGCR6LQ9BY27 220 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 PLGRKTQ9HBL7 147 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 VPS4BO75351 444 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 CCNG1P51959 295 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 PSME3P61289 254 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 C1DQ13901 141 aaKnown RBP17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 SLC5A9Q2M3M2 681 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 PHF13Q86YI8 300 aaPredicted RBP17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 ASB2Q96Q27 587 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 PCDHA11Q9Y5I1 949 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 AK5Q9Y6K8 562 aa17.46■□□□□ 0.39
PTP4A1-201ENST00000370651 GRIA3P42263 894 aa17.46■□□□□ 0.38
PTP4A1-201ENST00000370651 XIAPP98170 497 aa17.46■□□□□ 0.38
PTP4A1-201ENST00000370651 RGS21Q2M5E4 152 aa17.46■□□□□ 0.38
PTP4A1-201ENST00000370651 SLC44A2Q8IWA5 706 aaPredicted RBP17.46■□□□□ 0.38
PTP4A1-201ENST00000370651 VAT1Q99536 393 aa17.46■□□□□ 0.38
PTP4A1-201ENST00000370651 REXO4Q9GZR2 422 aaKnown RBP17.46■□□□□ 0.38
PTP4A1-201ENST00000370651 PNMA8CA0A1B0GUJ8 204 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 MSH3P20585 1137 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 EFCAB3Q8N7B9 438 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 LENG1Q96BZ8 264 aaPredicted RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 MROH1Q8NDA8 1641 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 IFNA14P01570 189 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 CYP1A1P04798 512 aaPredicted RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 ITGALP20701 1170 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 LHX1P48742 406 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 NEK3P51956 506 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 CRADDP78560 199 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 CNTN1Q12860 1018 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 ILF2Q12905 390 aaKnown RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 C15orf59Q2T9L4 293 aaPredicted RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 MAGEE2Q8TD90 523 aaPredicted RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 NDEL1Q9GZM8 345 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 PRDM5Q9NQX1 630 aaPredicted RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 CACNA2D2Q9NY47 1150 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 SLC17A7Q9P2U7 560 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 PLA2G4CQ9UP65 541 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 PRG3Q9Y2Y8 225 aaPredicted RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 AP4B1Q9Y6B7 739 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 TMEM114B3SHH9 223 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 ACKR2O00590 384 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 TRIM38O00635 465 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 TGFB1I1O43294 461 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 OXCT1P55809 520 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 TAS2R40P59535 323 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 SNAPC2Q13487 334 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 C19orf18Q8NEA5 215 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 RP9Q8TA86 221 aaKnown RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 EDEM1Q92611 657 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 CERS2Q96G23 380 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 NDNQ99608 321 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 HSD3B7Q9H2F3 369 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 SALL4Q9UJQ4 1053 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 TCRBV9S1A1TA0A576 114 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 ZBTB7AO95365 584 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 KRT6AP02538 564 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 KRT6BP04259 564 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 ALOX12P18054 663 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 TKTP29401 623 aaKnown RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 KRT6CP48668 564 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 GMPSP49915 693 aaPredicted RBP17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 NOMO3P69849 1222 aa17.45■□□□□ 0.38
PTP4A1-201ENST00000370651 MAD2L1Q13257 205 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms