RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 MAGEB5Q9BZ81 275 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 TMEM248Q9NWD8 314 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 MPP6Q9NZW5 540 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 KIAA1522Q9P206 1035 aaPredicted RBP16■□□□□ 0.15
PRPF38B-202ENST00000370022 CLEC4EQ9ULY5 219 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 NEU3Q9UQ49 428 aa16■□□□□ 0.15
PRPF38B-202ENST00000370022 WASH4PA8MWX3 477 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 H3BRJ5 948 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 STK25O00506 426 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 PALMO75781 387 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 CNTN5O94779 1100 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 MOCS3O95396 460 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 CD72P21854 359 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 HLA-FP30511 346 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 TNFRSF4P43489 277 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 MAPKAPK2P49137 400 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 CDH6P55285 790 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 LRRC32Q14392 662 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 EIF4HQ15056 248 aaKnown RBP15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 E2F5Q15329 346 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 DGKKQ5KSL6 1271 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 ZFYVE27Q5T4F4 411 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 ZNF783Q6ZMS7 281 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 RFX8Q6ZV50 586 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 BMP8AQ7Z5Y6 402 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 VSIG1Q86XK7 387 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 AHI1Q8N157 1196 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 KCTD6Q8NC69 237 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 PKNOX2Q96KN3 472 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 ALS2CR12Q96Q35 445 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 FBRSL1Q9HCM7 1045 aaKnown RBP15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 GGA2Q9UJY4 613 aa15.99■□□□□ 0.15
PRPF38B-202ENST00000370022 CCDC66A2RUB6 948 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 TBC1D3BA6NDS4 549 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 GOLGA6L9A6NEM1 432 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 DAPK3O43293 454 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 TIMM44O43615 452 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 PABPC1P11940 636 aaKnown RBP15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 OR1E1P30953 314 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 GJC1P36383 396 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 IRAK1P51617 712 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 ARSEP51690 589 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 KDSRQ06136 332 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 CCINQ13939 588 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 DMC1Q14565 340 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 UBXN2BQ14CS0 331 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 ODF2Q5BJF6 829 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 NAIF1Q69YI7 327 aaPredicted RBP15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 FSTL4Q6MZW2 842 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 KIAA0907Q7Z7F0 614 aaPredicted RBP15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 NLRP14Q86W24 1093 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 CIR1Q86X95 450 aaPredicted RBP15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 ZNF687Q8N1G0 1237 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 PJA1Q8NG27 643 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 KCNV2Q8TDN2 545 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 ZNF670Q9BS34 389 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 GOLPH3Q9H4A6 298 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 PCDH18Q9HCL0 1135 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 ABCB8Q9NUT2 735 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 CWC15Q9P013 229 aaKnown RBP15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 ZNF212Q9UDV6 495 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 AMFRQ9UKV5 643 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 NDRG2Q9UN36 371 aaKnown RBP15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 HYOU1Q9Y4L1 999 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 CAPN6Q9Y6Q1 641 aa15.98■□□□□ 0.15
PRPF38B-202ENST00000370022 NCOR1O75376 2440 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 FAM170BA6NMN3 283 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 ZNF487B1APH4 448 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 GOT1P17174 413 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 TARSP26639 723 aaKnown RBP15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 CTNNA1P35221 906 aaKnown RBP15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 ETFBP38117 255 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 MAGEA9P43362 315 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 LMAN2Q12907 356 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 ATP13A4Q4VNC1 1196 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 FSCBQ5H9T9 825 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 CXorf57Q6NSI4 855 aaKnown RBP15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 PEX26Q7Z412 305 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 TFAP2DQ7Z6R9 452 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 NT5DC3Q86UY8 548 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 RTL3Q8N8U3 475 aaKnown RBP15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 FLCNQ8NFG4 579 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 TRIM58Q8NG06 486 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 WFDC5Q8TCV5 224 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 TSC1Q92574 1164 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 LMLNQ96KR4 655 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 EPHX3Q9H6B9 360 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 STARD13Q9Y3M8 1113 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 SIT1Q9Y3P8 196 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 KIAA1549LQ6ZVL6 1849 aa15.97■□□□□ 0.15
PRPF38B-202ENST00000370022 ILVBLA1L0T0 632 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 MIF4GDA9UHW6 222 aaKnown RBP15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 TRIM24O15164 1050 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 RHOCP08134 193 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 CHRNB1P11230 501 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 KDELR1P24390 212 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 CTNNA2P26232 953 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 CD70P32970 193 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 CLCN5P51795 746 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 PLK1P53350 603 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms