RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 ABATP80404 500 aa16.05■□□□□ 0.16
PRDM1-203ENST00000369096 SAMD4BQ5PRF9 694 aaKnown RBP16.05■□□□□ 0.16
PRDM1-203ENST00000369096 C16orf86Q6ZW13 317 aa16.05■□□□□ 0.16
PRDM1-203ENST00000369096 OXNAD1Q96HP4 312 aaPredicted RBP16.05■□□□□ 0.16
PRDM1-203ENST00000369096 TMEM237Q96Q45 408 aa16.05■□□□□ 0.16
PRDM1-203ENST00000369096 ZCCHC2Q9C0B9 1178 aaKnown RBP16.05■□□□□ 0.16
PRDM1-203ENST00000369096 KDM6AO15550 1401 aaPredicted RBP16.05■□□□□ 0.16
PRDM1-203ENST00000369096 TYMPP19971 482 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 AKR1D1P51857 326 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 HUNKP57058 714 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 COPZ1P61923 177 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
PRDM1-203ENST00000369096 INO80DQ53TQ3 878 aaPredicted RBP16.04■□□□□ 0.16
PRDM1-203ENST00000369096 KCNMB4Q86W47 210 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 GRIP2Q9C0E4 1043 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 THAP1Q9NVV9 213 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 TBKBP1A7MCY6 615 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 SMIM22K7EJ46 135 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 VAPBO95292 243 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 EPHB3P54753 998 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 PGBD2Q6P3X8 592 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 NYAP1Q6ZVC0 841 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ADAMTS13Q76LX8 1427 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ARHGAP22Q7Z5H3 698 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ACTRT1Q8TDG2 376 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 APBB2Q92870 758 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 CGRRF1Q99675 332 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ELL3Q9HB65 397 aaPredicted RBP16.04■□□□□ 0.16
PRDM1-203ENST00000369096 NMRAL1Q9HBL8 299 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 INVSQ9Y283 1065 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 OVOS2A0A0J9YW53 1432 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 OVOS2Q6IE36 1432 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 RAMP2O60895 175 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 NFE2Q16621 373 aaPredicted RBP16.04■□□□□ 0.16
PRDM1-203ENST00000369096 TCEAL5Q5H9L2 206 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ZFP1Q6P2D0 407 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ARMC8Q8IUR7 673 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 SYT12Q8IV01 421 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 HERC6Q8IVU3 1022 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 CHPFQ8IZ52 775 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 TAS1R2Q8TE23 839 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 FNIP1Q8TF40 1166 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 EDEM1Q92611 657 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
PRDM1-203ENST00000369096 CISHQ9NSE2 258 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 L1RE1Q9UN81 338 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 C15orf38-AP3S2A0A0A6YYH1 394 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 IDH3BO43837 385 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 MGRN1O60291 552 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 CAMTA2O94983 1202 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 MYL4P12829 197 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 PTPN11Q06124 597 aaPredicted RBP16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ZNF280DQ6N043 979 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 LRRC74BQ6ZQY2 392 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ARPINQ7Z6K5 226 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 ENTPD4Q9Y227 616 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 USP31Q70CQ4 1352 aa16.04■□□□□ 0.16
PRDM1-203ENST00000369096 CYP1A1P04798 512 aaPredicted RBP16.03■□□□□ 0.16
PRDM1-203ENST00000369096 THP07101 528 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 DNAJB2P25686 324 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 USP46P62068 366 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 MYBPC2Q14324 1141 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 TMC7Q7Z402 723 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 SLC5A5Q92911 643 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 SLC25A23Q9BV35 468 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 PCDH9Q9HC56 1237 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 ATP13A1Q9HD20 1204 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 CDH9Q9ULB4 789 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 CNTNAP5Q8WYK1 1306 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 RBAK-RBAKDNI3L0D1 243 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 RGS20O76081 388 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 TFRCP02786 760 aaKnown RBP16.03■□□□□ 0.16
PRDM1-203ENST00000369096 CETPP11597 493 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 VPS72Q15906 364 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 FRMD6Q96NE9 622 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 ATXN2Q99700 1313 aaKnown RBP16.03■□□□□ 0.16
PRDM1-203ENST00000369096 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.03■□□□□ 0.16
PRDM1-203ENST00000369096 BTN3A1O00481 513 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 SSNA1O43805 119 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 PRLRP16471 622 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 PRKAG1P54619 331 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 MYL6P60660 151 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 ATG9AQ7Z3C6 839 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 CACUL1Q86Y37 369 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 TMEM176AQ96HP8 235 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 ANKRD27Q96NW4 1050 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 YME1L1Q96TA2 773 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 TRIT1Q9H3H1 467 aaKnown RBP16.03■□□□□ 0.16
PRDM1-203ENST00000369096 ATXN3LQ9H3M9 355 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 RBM7Q9Y580 266 aaKnown RBP16.03■□□□□ 0.16
PRDM1-203ENST00000369096 NTRK1P04629 796 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 MZT2AQ6P582 158 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 MFSD7Q6UXD7 560 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 FBXO30Q8TB52 745 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 RACGAP1Q9H0H5 632 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 RHBGQ9H310 441 aa16.03■□□□□ 0.16
PRDM1-203ENST00000369096 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms