RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 OTUB2Q96DC9 234 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 SMG9Q9H0W8 520 aaKnown RBP12.66□□□□□ -0.38
TUBE1-202ENST00000368662 CCL26Q9Y258 94 aa12.66□□□□□ -0.38
TUBE1-202ENST00000368662 UTP11Q9Y3A2 253 aaKnown RBP12.66□□□□□ -0.38
TUBE1-202ENST00000368662 C2orf16Q68DN1 1984 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 A0A1B0GVM2 712 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 BCLAF3A2AJT9 711 aaKnown RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 TCAF2A6NFQ2 919 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 SLC9A3R1O14745 358 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 PRAMEF12O95522 483 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 RHOXF2BP0C7M4 288 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 KCNJ1P48048 391 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 ZNF33AQ06730 810 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 SLC10A2Q12908 348 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 PPP1R7Q15435 360 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 ZNF77Q15935 545 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 DARS2Q6PI48 645 aaKnown RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 ZC3H18Q86VM9 953 aaKnown RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 HJURPQ8NCD3 748 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 TTC16Q8NEE8 873 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 TFB1MQ8WVM0 346 aaKnown RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 RSAD2Q8WXG1 361 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 SMARCD2Q92925 531 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 E2F7Q96AV8 911 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 LRCH3Q96II8 777 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 ZSWIM3Q96MP5 696 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 NECTIN4Q96NY8 510 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 RHOXF2Q9BQY4 288 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 OBP2AQ9NY56 170 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 TTI1O43156 1089 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 MCM3P25205 808 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 MPPE1Q53F39 396 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 ALFQ53S48 1182 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 SLC45A4Q5BKX6 768 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 MPP7Q5T2T1 576 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 C6orf118Q5T5N4 469 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 JAMLQ86YT9 394 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 BBS7Q8IWZ6 715 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 ALLCQ8N6M5 410 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 NPWQ8N729 165 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 CCDC89Q8N998 374 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 TMA16Q96EY4 203 aaKnown RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 MSLNLQ96KJ4 702 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 PRICKLE1Q96MT3 831 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 FAM161BQ96MY7 647 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 ASB16Q96NS5 453 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 QKIQ96PU8 341 aaKnown RBP eCLIP12.65□□□□□ -0.383e-11■■■■□ 23.1
TUBE1-202ENST00000368662 TMEM121Q9BTD3 319 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 TRPV4Q9HBA0 871 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 CDH7Q9ULB5 785 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 MFHAS1Q9Y4C4 1052 aa12.65□□□□□ -0.38
TUBE1-202ENST00000368662 V9GYY5 206 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-202ENST00000368662 SGK1O00141 431 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 GFRA2O00451 464 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 MTSS1O43312 755 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 CNTN5O94779 1100 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 HEXIM1O94992 359 aaKnown RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 CYBBP04839 570 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 OR1E1P30953 314 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 LTBRP36941 435 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 PTGIRP43119 386 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 YBEYP58557 167 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 DLX2Q07687 328 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 GALNT2Q10471 571 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 PARP15Q460N3 678 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 HEATR6Q6AI08 1181 aaKnown RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 TFAP2DQ7Z6R9 452 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 SETD3Q86TU7 594 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 MICALL1Q8N3F8 863 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 TDRD5Q8NAT2 981 aaKnown RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 SMRP1Q8NCR6 262 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 HDAC11Q96DB2 347 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 KLC2Q9H0B6 622 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 DOCK4Q8N1I0 1966 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 ACTN2P35609 894 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 GARSP41250 739 aaKnown RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 ZNF177Q13360 481 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 PTK6Q13882 451 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 AFMIDQ63HM1 303 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 CCDC117Q8IWD4 279 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 CCNYQ8ND76 341 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 ERP44Q9BS26 406 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 ZNF212Q9UDV6 495 aa12.64□□□□□ -0.39
TUBE1-202ENST00000368662 NUP210Q8TEM1 1887 aaPredicted RBP12.64□□□□□ -0.39
TUBE1-202ENST00000368662 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 ARHGAP42A6NI28 874 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 RAMP2O60895 175 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
TUBE1-202ENST00000368662 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 UQCRHP07919 91 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 ETFBP38117 255 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 IRAK1P51617 712 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 RPS24P62847 133 aaKnown RBP12.63□□□□□ -0.39
TUBE1-202ENST00000368662 PPIDQ08752 370 aaKnown RBP12.63□□□□□ -0.39
TUBE1-202ENST00000368662 AP1B1Q10567 949 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms