RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 A0A1B0GVM2 712 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 A0A1W2PQC6 194 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 TCAF2A6NFQ2 919 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 IGLV3-19P01714 112 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 ASLP04424 464 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 CTSOP43234 321 aaPredicted RBP19.55■□□□□ 0.72
CKS1B-203ENST00000368439 PLK1P53350 603 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 PUM1Q14671 1186 aaKnown RBP eCLIP19.55■□□□□ 0.72
CKS1B-203ENST00000368439 NR1I3Q14994 352 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 RABGAP1LQ5R372 815 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 PEAR1Q5VY43 1037 aaPredicted RBP19.55■□□□□ 0.72
CKS1B-203ENST00000368439 CYP2U1Q7Z449 544 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 PHLDB2Q86SQ0 1253 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 EMC1Q8N766 993 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 OR52K2Q8NGK3 314 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 OR2T3Q8NH03 318 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 JOSD2Q8TAC2 188 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 ALG14Q96F25 216 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 RPRD1AQ96P16 312 aaPredicted RBP19.55■□□□□ 0.72
CKS1B-203ENST00000368439 TMEM74BQ9NUR3 256 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 MYO6Q9UM54 1294 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 ERVW-1Q9UQF0 538 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 SNX10Q9Y5X0 201 aa19.55■□□□□ 0.72
CKS1B-203ENST00000368439 TCRBV5S1A1TA0A578 114 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 AP5Z1O43299 807 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 GJB6O95452 261 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 FERP16591 822 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 MZF1P28698 734 aaPredicted RBP19.54■□□□□ 0.72
CKS1B-203ENST00000368439 RPL6Q02878 288 aaKnown RBP19.54■□□□□ 0.72
CKS1B-203ENST00000368439 SLC12A1Q13621 1099 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 RAB6CQ53S08 254 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 ARMCX6Q7L4S7 300 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 LUZP1Q86V48 1076 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 SLC41A1Q8IVJ1 513 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 CCDC117Q8IWD4 279 aaPredicted RBP19.54■□□□□ 0.72
CKS1B-203ENST00000368439 KDM1BQ8NB78 822 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 NETO1Q8TDF5 533 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 SIPA1Q96FS4 1042 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 C1orf74Q96LT6 269 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 TTYH3Q9C0H2 523 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 RAB6CQ9H0N0 254 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 MTG2Q9H4K7 406 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 TMEM51Q9NW97 253 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 WSB2Q9NYS7 404 aaPredicted RBP19.54■□□□□ 0.72
CKS1B-203ENST00000368439 NUMA1Q14980 2115 aa19.54■□□□□ 0.72
CKS1B-203ENST00000368439 ITIH6Q6UXX5 1313 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 C2CD4BA6NLJ0 364 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 PATE3B3GLJ2 98 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 CNTN5O94779 1100 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 SRPRAP08240 638 aaKnown RBP19.53■□□□□ 0.72
CKS1B-203ENST00000368439 PTMSP20962 102 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 SDHBP21912 280 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 NSFP46459 744 aaKnown RBP19.53■□□□□ 0.72
CKS1B-203ENST00000368439 TPMTP51580 245 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 LIMK1P53667 647 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 ARID5BQ14865 1188 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 CCDC14Q49A88 953 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 FILIP1LQ4L180 1135 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 SND1Q7KZF4 910 aaKnown RBP eCLIP19.53■□□□□ 0.72
CKS1B-203ENST00000368439 MON1BQ7L1V2 547 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 DEFB119Q8N690 84 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 RXFP2Q8WXD0 754 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 PIGKQ92643 395 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 PRCCQ92733 491 aaPredicted RBP19.53■□□□□ 0.72
CKS1B-203ENST00000368439 ZNF419Q96HQ0 510 aaPredicted RBP19.53■□□□□ 0.72
CKS1B-203ENST00000368439 SIK2Q9H0K1 926 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 ADAM22Q9P0K1 906 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 SUN2Q9UH99 717 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 PILRBQ9UKJ0 227 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 CDV3Q9UKY7 258 aaKnown RBP19.53■□□□□ 0.72
CKS1B-203ENST00000368439 TBC1D30Q9Y2I9 924 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 OR51B4Q9Y5P0 310 aa19.53■□□□□ 0.72
CKS1B-203ENST00000368439 LRRC53A6NM62 1247 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 DRGXA6NNA5 263 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 SLC30A4O14863 429 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 PDGFRAP16234 1089 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 ITPKAP23677 461 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 CD6P30203 668 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 RDXP35241 583 aaKnown RBP19.52■□□□□ 0.72
CKS1B-203ENST00000368439 ECT2LQ008S8 904 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 ZNF33AQ06730 810 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 C15orf59Q2T9L4 293 aaPredicted RBP19.52■□□□□ 0.72
CKS1B-203ENST00000368439 HNRNPA1L2Q32P51 320 aaKnown RBP19.52■□□□□ 0.72
CKS1B-203ENST00000368439 ZSCAN23Q3MJ62 389 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 AASDHQ4L235 1098 aaPredicted RBP19.52■□□□□ 0.72
CKS1B-203ENST00000368439 ALFQ53S48 1182 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 SH3PXD2AQ5TCZ1 1133 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 LYSMD4Q5XG99 296 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 E4F1Q66K89 784 aaPredicted RBP19.52■□□□□ 0.72
CKS1B-203ENST00000368439 SYT12Q8IV01 421 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 C12orf50Q8NA57 414 aaPredicted RBP19.52■□□□□ 0.72
CKS1B-203ENST00000368439 CENPIQ92674 756 aaPredicted RBP19.52■□□□□ 0.72
CKS1B-203ENST00000368439 RTKNQ9BST9 563 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 FBRSQ9HAH7 460 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 SLCO3A1Q9UIG8 710 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 PAXBP1Q9Y5B6 917 aa19.52■□□□□ 0.72
CKS1B-203ENST00000368439 ADAMTS9Q9P2N4 1935 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 IGLV3-10A0A075B6K4 115 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 CLDN11O75508 207 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 MOCS3O95396 460 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms