RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CNTN5O94779 1100 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 PRKCHP24723 683 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 CNR2P34972 360 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 ADKP55263 362 aaKnown RBP23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 ZNF252P-AS1Q0IIN9 211 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 ASTE1Q2TB18 679 aaPredicted RBP23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 PITRM1Q5JRX3 1037 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 SDE2Q6IQ49 451 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 ALYREFQ86V81 257 aaKnown RBP23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 VPS36Q86VN1 386 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 APCDD1Q8J025 514 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 ERLEC1Q96DZ1 483 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 ALG14Q96F25 216 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 MYO19Q96H55 970 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 TPSD1Q9BZJ3 242 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 ABHD10Q9NUJ1 306 aa23.13■■□□□ 1.29
ECHDC1-203ENST00000368291 CEP192Q8TEP8 1941 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 SDK1Q7Z5N4 2213 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 THADAQ6YHU6 1953 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 ANKRD62A6NC57 917 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 TMEM191CA6NGB0 347 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 LMNAP02545 664 aaKnown RBP23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 DLDP09622 509 aaKnown RBP23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 GABRG2P18507 467 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 POLR2EP19388 210 aaKnown RBP23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 MZF1P28698 734 aaPredicted RBP23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 EIF4A3P38919 411 aaKnown RBP23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 ACBD5Q5T8D3 534 aaPredicted RBP23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 TMC6Q7Z403 805 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 NTAN1Q96AB6 310 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 TMEM245Q9H330 911 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 MPP6Q9NZW5 540 aa23.12■■□□□ 1.29
ECHDC1-203ENST00000368291 OTOGLQ3ZCN5 2332 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 RALGAPA1Q6GYQ0 2036 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 GPR179Q6PRD1 2367 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 CLDN11O75508 207 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 MYBL1P10243 752 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 CSKP41240 450 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 PLK1P53350 603 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 CDH4P55283 916 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 NRG1Q02297 640 aaPredicted RBP23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 MAPK8IP2Q13387 824 aaPredicted RBP23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 PLEKHG6Q3KR16 790 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 MANEALQ5VSG8 457 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 ALKBH5Q6P6C2 394 aaKnown RBP23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 CCDC117Q8IWD4 279 aaPredicted RBP23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 ARFGAP1Q8N6T3 406 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 HMGB4Q8WW32 186 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 GAB3Q8WWW8 586 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 TRIM11Q96F44 468 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 CHP1Q99653 195 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 OSBPL2Q9H1P3 480 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 MYO1AQ9UBC5 1043 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 ZNF212Q9UDV6 495 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 TBC1D30Q9Y2I9 924 aa23.11■■□□□ 1.29
ECHDC1-203ENST00000368291 ZFHX2Q9C0A1 2572 aaPredicted RBP23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 FAM72CH0Y354 149 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 ALDH1A2O94788 518 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 ATP5BP06576 529 aaKnown RBP23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 HOXD11P31277 338 aaPredicted RBP23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 CTSOP43234 321 aaPredicted RBP23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 NUMBP49757 651 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 SCAPQ12770 1279 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 ARL13BQ3SXY8 428 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 FAM72AQ5TYM5 149 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 FAM72DQ6L9T8 149 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 SERPINA13PQ6UXR4 307 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 LRRC31Q6UY01 552 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 FAM72BQ86X60 149 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 FNIP1Q8TF40 1166 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 MRGPRX3Q96LB0 322 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 THAP2Q9H0W7 228 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 OR12D3Q9UGF7 316 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 SMG5Q9UPR3 1016 aaKnown RBP23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 NEU3Q9UQ49 428 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 OR51B4Q9Y5P0 310 aa23.1■■□□□ 1.29
ECHDC1-203ENST00000368291 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 SSU72P8A0A1W2PR75 194 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 GFRA3O60609 400 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 SRGAP2O75044 1071 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 RPP40O75818 363 aaKnown RBP23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 HLA-EP13747 358 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 ZNF75DP51815 510 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 GFPT1Q06210 699 aaPredicted RBP23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 ZNF177Q13360 481 aaPredicted RBP23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 SLC12A1Q13621 1099 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 SIM2Q14190 667 aaPredicted RBP23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 E2F5Q15329 346 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 CCDC122Q5T0U0 273 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 ZNF366Q8N895 744 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 SLC6A17Q9H1V8 727 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 PPARGC1AQ9UBK2 798 aaKnown RBP23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 PLA2G4CQ9UP65 541 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 SCINQ9Y6U3 715 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 PIEZO1Q92508 2521 aa23.09■■□□□ 1.29
ECHDC1-203ENST00000368291 FAM186AA6NE01 2351 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 RIF1Q5UIP0 2472 aaKnown RBP23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 DCLK1O15075 740 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 ASLP04424 464 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 TPM1P09493 284 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms