RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 ADCY6O43306 1168 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 S100A9P06702 114 aaKnown RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 NOS2P35228 1153 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 USP46P62068 366 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 UGT3A1Q6NUS8 523 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 DGCR14Q96DF8 476 aaKnown RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 PCDHB18PQ96TA0 734 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 TBC1D13Q9NVG8 400 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 PCDHB5Q9Y5E4 795 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 UMODL1Q5DID0 1318 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 ZMYM2Q9UBW7 1377 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 CCDC189A1A4V9 331 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 VPS26AO75436 327 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 LRG1P02750 347 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 POLR2EP19388 210 aaKnown RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 SOX11P35716 441 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 SERPINB5P36952 375 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 IL12RB1P42701 662 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 RENBPP51606 427 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 AUHQ13825 339 aaKnown RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 GTF2H3Q13889 308 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 AARS2Q5JTZ9 985 aaKnown RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 LUZP2Q86TE4 346 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 LZTR1Q8N653 840 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 QKIQ96PU8 341 aaKnown RBP eCLIP13.54□□□□□ -0.245e-7■■■■■ 27.3
PTPRK-204ENST00000368210 EFCAB1Q9HAE3 211 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 CYLDQ9NQC7 956 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 PARP4Q9UKK3 1724 aaKnown RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 RBP1P09455 135 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 MBL2P11226 248 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 PTPN1P18031 435 aaKnown RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 PGAM1P18669 254 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 C4BPBP20851 252 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 POLD3Q15054 466 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 TTLL9Q3SXZ7 439 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 SGO1Q5FBB7 561 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 TTC30AQ86WT1 665 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 TMEM86AQ8N2M4 240 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 MRPS31Q92665 395 aaKnown RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 WNT8BQ93098 351 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 HMG20AQ9NP66 347 aa13.54□□□□□ -0.24
PTPRK-204ENST00000368210 FBXO9Q9UK97 447 aaPredicted RBP13.54□□□□□ -0.24
PTPRK-204ENST00000368210 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 DCDC2CA8MYV0 355 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ADAMTS3O15072 1205 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TUBP50607 506 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 CSHL1Q14406 222 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 HSDL1Q3SXM5 330 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TREML2Q5T2D2 321 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 FAM183BPQ6ZVS7 135 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 BBS12Q6ZW61 710 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 POLNQ7Z5Q5 900 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TFAP2DQ7Z6R9 452 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 MICU2Q8IYU8 434 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ZBTB8BQ8NAP8 495 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 FAM136AQ96C01 138 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 DCUN1D5Q9BTE7 237 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 RBM47A0AV96 593 aaKnown RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 HEATR9A2RTY3 570 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 SLCO1B7G3V0H7 640 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 USP17L7P0C7H9 530 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ADRA1DP25100 572 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TBX4P57082 545 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 YAF2Q8IY57 180 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ART4Q93070 314 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ST6GALNAC4Q9H4F1 302 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TLR8Q9NR97 1041 aaKnown RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 COL20A1Q9P218 1284 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 RNF112Q9ULX5 631 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TRDMT1O14717 391 aaKnown RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 RHOCP08134 193 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 HSPA1AP0DMV8 641 aaKnown RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 HSPA1BP0DMV9 641 aaKnown RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 BDNFP23560 247 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 RPL22P35268 128 aaKnown RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TAS2R40P59535 323 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 SLC45A4Q5BKX6 768 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ALLCQ8N6M5 410 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ZNF555Q8NEP9 628 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 CENPTQ96BT3 561 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 SERPINB11Q96P15 392 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 MRPS26Q9BYN8 205 aaKnown RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 SELENONQ9NZV5 590 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 SAC3D1A6NKF1 404 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 RAMP2O60895 175 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 GUCY1B2O75343 617 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 CRTAMO95727 393 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 NUDT17P0C025 328 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 NPY2RP49146 381 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 KPNA1P52294 538 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 RAB15P59190 212 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 AASDHQ4L235 1098 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 CES3Q6UWW8 571 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms