RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TRNP1Q6NT89 227 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 KIAA1211LQ6NV74 962 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 LRRC31Q6UY01 552 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 MON1BQ7L1V2 547 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 STRADAQ7RTN6 431 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 ZNF571Q7Z3V5 609 aaPredicted RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 C14orf80Q86SX3 495 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 KBTBD6Q86V97 674 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 CCAR2Q8N163 923 aaKnown RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 FAM160A2Q8N612 972 aaPredicted RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 KDM1BQ8NB78 822 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 C3orf20Q8ND61 904 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 ANKK1Q8NFD2 765 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 JOSD2Q8TAC2 188 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 CPLX3Q8WVH0 158 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 SORCS1Q8WY21 1168 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 CENPIQ92674 756 aaPredicted RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 IGSF8Q969P0 613 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 RPRD1AQ96P16 312 aaPredicted RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 HAPLN3Q96S86 360 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 HINFPQ9BQA5 517 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 SELENOOQ9BVL4 669 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 DUSP15Q9H1R2 295 aaPredicted RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 TMEM245Q9H330 911 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 INTS6Q9UL03 887 aaKnown RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 VANGL2Q9ULK5 521 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 CAPN11Q9UMQ6 739 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 INVSQ9Y283 1065 aa10.17□□□□□ -0.78
CD48-202ENST00000368046 LUC7L2Q9Y383 392 aaKnown RBP10.17□□□□□ -0.78
CD48-202ENST00000368046 PIEZO1Q92508 2521 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 MYOFQ9NZM1 2061 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.16□□□□□ -0.78
CD48-202ENST00000368046 A0A1B0GVM2 712 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 TCRBV5S1A1TA0A578 114 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ANKRD62A6NC57 917 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 TCAF2A6NFQ2 919 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 I6L893 689 aaPredicted RBP10.16□□□□□ -0.78
CD48-202ENST00000368046 CBFA2T2O43439 604 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 LRP3O75074 770 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 RTN2O75298 545 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ASLP04424 464 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 EPHX1P07099 455 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 SKILP12757 684 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ADRA1BP35368 520 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ATXN1P54253 815 aaKnown RBP10.16□□□□□ -0.78
CD48-202ENST00000368046 CDH4P55283 916 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ST8SIA6P61647 398 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ZBED6P86452 979 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ATP11AP98196 1134 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 KCNC4Q03721 635 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ZNF177Q13360 481 aaPredicted RBP10.16□□□□□ -0.78
CD48-202ENST00000368046 ELF2Q15723 593 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 PTPRNQ16849 979 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 MAP7D1Q3KQU3 841 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ARL13BQ3SXY8 428 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 FUT11Q495W5 492 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 PITRM1Q5JRX3 1037 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 SH3PXD2AQ5TCZ1 1133 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 SERPINA13PQ6UXR4 307 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.16□□□□□ -0.78
CD48-202ENST00000368046 RLN3Q8WXF3 142 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 MRGPRX1Q96LB2 322 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 XPO4Q9C0E2 1151 aaKnown RBP10.16□□□□□ -0.78
CD48-202ENST00000368046 ANLNQ9NQW6 1124 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 ITM2CQ9NQX7 267 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 TBC1D30Q9Y2I9 924 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.16□□□□□ -0.78
CD48-202ENST00000368046 RAD54BQ9Y620 910 aa10.16□□□□□ -0.78
CD48-202ENST00000368046 TMCO5BA8MYB1 307 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 DDX3XO00571 662 aaKnown RBP eCLIP10.15□□□□□ -0.78
CD48-202ENST00000368046 SRGAP2O75044 1071 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 GJB6O95452 261 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 FTLP02792 175 aaPredicted RBP10.15□□□□□ -0.78
CD48-202ENST00000368046 SRPRAP08240 638 aaKnown RBP10.15□□□□□ -0.78
CD48-202ENST00000368046 NDUFV2P19404 249 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 GPD1P21695 349 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 TGM1P22735 817 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 RRM1P23921 792 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 NNMTP40261 264 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 CSKP41240 450 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 ZNF143P52747 638 aaPredicted RBP10.15□□□□□ -0.78
CD48-202ENST00000368046 ECT2LQ008S8 904 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 SULT2A1Q06520 285 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 CAMK2GQ13555 558 aaPredicted RBP10.15□□□□□ -0.78
CD48-202ENST00000368046 CDO1Q16878 200 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 C15orf59Q2T9L4 293 aaPredicted RBP10.15□□□□□ -0.78
CD48-202ENST00000368046 PLEKHG6Q3KR16 790 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 FNDC3BQ53EP0 1204 aaKnown RBP10.15□□□□□ -0.78
CD48-202ENST00000368046 SPDYCQ5MJ68 293 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 E4F1Q66K89 784 aaPredicted RBP10.15□□□□□ -0.78
CD48-202ENST00000368046 HGSNATQ68CP4 663 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 PLEKHA7Q6IQ23 1121 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 DNAJC24Q6P3W2 148 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 DCUN1D2Q6PH85 259 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 SLC36A4Q6YBV0 504 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 FAM131BQ86XD5 332 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 TMPRSS6Q8IU80 811 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 DRC7Q8IY82 874 aa10.15□□□□□ -0.78
CD48-202ENST00000368046 ZNF683Q8IZ20 524 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms