RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 POMCP01189 267 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 NEFHP12036 1026 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 CCNB1P14635 433 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 HNRNPH1P31943 449 aaKnown RBP14.38□□□□□ -0.11
USF1-202ENST00000368020 AFF1P51825 1210 aaKnown RBP14.38□□□□□ -0.11
USF1-202ENST00000368020 GALNT2Q10471 571 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 SPRED3Q2MJR0 410 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 CYB5D1Q6P9G0 228 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 BHLHA9Q7RTU4 235 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 OTOAQ7RTW8 1153 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 PID1Q7Z2X4 250 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 ZNF598Q86UK7 904 aaKnown RBP14.38□□□□□ -0.11
USF1-202ENST00000368020 SPATA2LQ8IUW3 424 aaPredicted RBP14.38□□□□□ -0.11
USF1-202ENST00000368020 LZTR1Q8N653 840 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 FITM2Q8N6M3 262 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 PDCD7Q8N8D1 485 aaKnown RBP14.38□□□□□ -0.11
USF1-202ENST00000368020 URGCPQ8TCY9 931 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 SEPT8Q92599 483 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 ABHD8Q96I13 439 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 HAPLN3Q96S86 360 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 TSSK1BQ9BXA7 367 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 MAGEB5Q9BZ81 275 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 GBA3Q9H227 469 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 ECT2Q9H8V3 914 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 TXNDC16Q9P2K2 825 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 PLLPQ9Y342 182 aa14.38□□□□□ -0.11
USF1-202ENST00000368020 I3L4J1 428 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 BIRC5O15392 142 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 BDNFP23560 247 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 PSMB4P28070 264 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 CRHR1P34998 444 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
USF1-202ENST00000368020 YWHAHQ04917 246 aaPredicted RBP14.37□□□□□ -0.11
USF1-202ENST00000368020 PRPSAP1Q14558 356 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
USF1-202ENST00000368020 ZNF276Q8N554 614 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 C10orf82Q8WW14 230 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 RNF34Q969K3 372 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 RMDN2Q96LZ7 410 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 RAB3IPQ96QF0 476 aaPredicted RBP14.37□□□□□ -0.11
USF1-202ENST00000368020 TUBB6Q9BUF5 446 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 TKTL2Q9H0I9 626 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 LRRC40Q9H9A6 602 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 PLAC1Q9HBJ0 212 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 RGS18Q9NS28 235 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 DONSONQ9NYP3 566 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 FNIP2Q9P278 1114 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 SLC17A7Q9P2U7 560 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 CACNG4Q9UBN1 327 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 MFHAS1Q9Y4C4 1052 aa14.37□□□□□ -0.11
USF1-202ENST00000368020 MYO16Q9Y6X6 1858 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 UNC5CO95185 931 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 IGLV3-25P01717 112 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 ATP5BP06576 529 aaKnown RBP14.36□□□□□ -0.11
USF1-202ENST00000368020 PTPN3P26045 913 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 EPHB2P29323 1055 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 SERPINB4P48594 390 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 CACNA2D1P54289 1103 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 NCALDP61601 193 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 CDK18Q07002 472 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 MGAT5Q09328 741 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 NIPAL4Q0D2K0 466 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 RIPK1Q13546 671 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 CRYMQ14894 314 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 ARMC3Q5W041 872 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 SLC24A5Q71RS6 500 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 LINC00523Q86TU6 105 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 LRRC49Q8IUZ0 686 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 DCP1BQ8IZD4 617 aaKnown RBP14.36□□□□□ -0.11
USF1-202ENST00000368020 KLHL29Q96CT2 875 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 FUBP3Q96I24 572 aaKnown RBP eCLIP14.36□□□□□ -0.11
USF1-202ENST00000368020 PAAF1Q9BRP4 392 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 PPP1R12CQ9BZL4 782 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 SMOC2Q9H3U7 446 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 CATSPERBQ9H7T0 1116 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 SLCO1B3Q9NPD5 702 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 ARHGEF38Q9NXL2 777 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 INPP5FQ9Y2H2 1132 aa14.36□□□□□ -0.11
USF1-202ENST00000368020 WDR27A2RRH5 827 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 CXorf49A8MYA2 514 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 RFPL1O75677 317 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 CSH1P0DML2 217 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 CSH2P0DML3 217 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 CCR1P32246 355 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 BRCC3P46736 316 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 NPY2RP49146 381 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 CCL23P55773 120 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 FAM189BP81408 668 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 SNCBQ16143 134 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 NFE2Q16621 373 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 BTBD8Q5XKL5 378 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 NAPEPLDQ6IQ20 393 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TAC4Q86UU9 113 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 PARP9Q8IXQ6 854 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 ARHGAP18Q8N392 663 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 MPP5Q8N3R9 675 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 DBF4BQ8NFT6 615 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms