RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 NET1Q7Z628 596 aaPredicted RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 ZNF276Q8N554 614 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 NOA1Q8NC60 698 aaKnown RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 IRX2Q9BZI1 471 aaPredicted RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 CYP3A43Q9HB55 503 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 GJB4Q9NTQ9 266 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 CHURC1-FNTBB4DL54 471 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 KLRC1P26715 233 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 S100A3P33764 101 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 NRG3P56975 720 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 EFCAB12Q6NXP0 572 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 TRPV1Q8NER1 839 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 PARK7Q99497 189 aaKnown RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 FBXO44Q9H4M3 255 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 ABI2Q9NYB9 513 aaPredicted RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 MAGEB3O15480 346 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 ACTR3P61158 418 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 TSPAN14Q8NG11 270 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 SERPINA1P01009 418 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 CXCR2P25025 360 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 NTSP30990 170 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 STARD3Q14849 445 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 AKAP14Q86UN6 197 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 ZFP28Q8NHY6 868 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 CYP11B1P15538 503 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 LRPAP1P30533 357 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 TLX1P31314 330 aaPredicted RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 LIN7AO14910 233 aaPredicted RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 SEC22BO75396 215 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 SEMA3DO95025 777 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 PGK1P00558 417 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 MFSD7Q6UXD7 560 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 MEIOBQ8N635 442 aa12.66□□□□□ -0.38
TPR-201ENST00000367478 TDRD3Q9H7E2 651 aaKnown RBP12.66□□□□□ -0.38
TPR-201ENST00000367478 ZNF543Q08ER8 600 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 RALGDSQ12967 914 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 EPB41L1Q9H4G0 881 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 CCDC177Q9NQR7 707 aaPredicted RBP12.65□□□□□ -0.38
TPR-201ENST00000367478 TUBE1Q9UJT0 475 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 TMEM2Q9UHN6 1383 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 A0A1W2PQ72 361 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 GPR182O15218 404 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 LZTR1Q8N653 840 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 ZNF248Q8NDW4 579 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 C18orf25Q96B23 403 aaPredicted RBP12.65□□□□□ -0.38
TPR-201ENST00000367478 GIT1Q9Y2X7 761 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 FIGNQ5HY92 759 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 CBWD3Q5JTY5 395 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 CBWD5Q5RIA9 395 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.65□□□□□ -0.38
TPR-201ENST00000367478 A0A087WZ62 844 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 MYMKA6NI61 221 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 ERI2A8K979 691 aaKnown RBP12.65□□□□□ -0.38
TPR-201ENST00000367478 MYBP10242 640 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 CSHL1Q14406 222 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 EMC1Q8N766 993 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 DGCR6LQ9BY27 220 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 NMT2O60551 498 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 BMP7P18075 431 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 STK4Q13043 487 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 MTAPQ13126 283 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 METTL6Q8TCB7 284 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 EURLQ9NYK6 297 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 ABCA8O94911 1581 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 PRODHO43272 600 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 PGAM1P18669 254 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 SNAPC2Q13487 334 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 PAGE2Q7Z2X7 111 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 SNIP1Q8TAD8 396 aaKnown RBP12.65□□□□□ -0.38
TPR-201ENST00000367478 UBA3Q8TBC4 463 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 PCDHA3Q9Y5H8 950 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 HACD1B0YJ81 288 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 ITGB3P05106 788 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 ABATP80404 500 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 RBBP4Q09028 425 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 CRELD2Q6UXH1 353 aaPredicted RBP12.65□□□□□ -0.38
TPR-201ENST00000367478 SFRP1Q8N474 314 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 POC5Q8NA72 575 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 PPP2R3BQ9Y5P8 575 aa12.65□□□□□ -0.38
TPR-201ENST00000367478 SMCO3A2RU48 225 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 SCGNO76038 276 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 ITGA3P26006 1051 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 GSTT1P30711 240 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 PTENP60484 403 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 ROR2Q01974 943 aaKnown RBP12.65□□□□□ -0.39
TPR-201ENST00000367478 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.39
TPR-201ENST00000367478 ZNF621Q6ZSS3 439 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 DSG4Q86SJ6 1040 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 VCPIP1Q96JH7 1222 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 OSBPL11Q9BXB4 747 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 KCNF1Q9H3M0 494 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 TRIM10Q9UDY6 481 aa12.65□□□□□ -0.39
TPR-201ENST00000367478 SAMD9Q5K651 1589 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
TPR-201ENST00000367478 TYSND1Q2T9J0 566 aa12.64□□□□□ -0.39
TPR-201ENST00000367478 MILR1Q7Z6M3 343 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms