RNA–Protein interactions for RNA: ENST00000367378.5

PCMT1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-201ENST00000367378 SETSIPP0DME0 302 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 VDRP11473 427 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 PSMD8P48556 350 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 TBX4P57082 545 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 SFSWAPQ12872 951 aaKnown RBP22.31■■□□□ 1.16
PCMT1-201ENST00000367378 PITRM1Q5JRX3 1037 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 PMF1Q6P1K2 205 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 UBR7Q8N806 425 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 ZNF557Q8N988 423 aaPredicted RBP22.31■■□□□ 1.16
PCMT1-201ENST00000367378 KDM1BQ8NB78 822 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 TFAP2BQ92481 460 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 AZIN2Q96A70 460 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 FCRL3Q96P31 734 aaPredicted RBP22.31■■□□□ 1.16
PCMT1-201ENST00000367378 SLCO3A1Q9UIG8 710 aa22.31■■□□□ 1.16
PCMT1-201ENST00000367378 TARSL2A2RTX5 802 aaKnown RBP22.3■■□□□ 1.16
PCMT1-201ENST00000367378 TLR4O00206 839 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 RRP8O43159 456 aaKnown RBP22.3■■□□□ 1.16
PCMT1-201ENST00000367378 ARRB1P49407 418 aaPredicted RBP22.3■■□□□ 1.16
PCMT1-201ENST00000367378 NDUFA8P51970 172 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 ADPRHP54922 357 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 PPP2CBP62714 309 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 PPP2CAP67775 309 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 EDRF1Q3B7T1 1238 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 SFMBT2Q5VUG0 894 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 KANSL1Q7Z3B3 1105 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 SPATS2Q86XZ4 545 aaKnown RBP22.3■■□□□ 1.16
PCMT1-201ENST00000367378 CFAP52Q8N1V2 620 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 OR14C36Q8NHC7 312 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 SNIP1Q8TAD8 396 aaKnown RBP22.3■■□□□ 1.16
PCMT1-201ENST00000367378 SLC35F5Q8WV83 523 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 FCRL2Q96LA5 508 aaPredicted RBP22.3■■□□□ 1.16
PCMT1-201ENST00000367378 NUCKS1Q9H1E3 243 aaKnown RBP22.3■■□□□ 1.16
PCMT1-201ENST00000367378 COQ4Q9Y3A0 265 aa22.3■■□□□ 1.16
PCMT1-201ENST00000367378 EDDM13A0A1B0GTR0 161 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 LTFP02788 710 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 SRPRAP08240 638 aaKnown RBP22.29■■□□□ 1.16
PCMT1-201ENST00000367378 GOT1P17174 413 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 SYKP43405 635 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 RXRGP48443 463 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 LCLAT1Q6UWP7 414 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 SND1Q7KZF4 910 aaKnown RBP eCLIP22.29■■□□□ 1.163e-20■■■■■ 27.6
PCMT1-201ENST00000367378 SMYD4Q8IYR2 804 aaPredicted RBP22.29■■□□□ 1.16
PCMT1-201ENST00000367378 STK40Q8N2I9 435 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 IRGQQ8WZA9 623 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 ZSWIM1Q9BR11 485 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 ITIH6Q6UXX5 1313 aa22.29■■□□□ 1.16
PCMT1-201ENST00000367378 ZNF462Q96JM2 2506 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 BRINP1O60477 761 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 FYNP06241 537 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 EPB41P11171 864 aaKnown RBP22.28■■□□□ 1.16
PCMT1-201ENST00000367378 PLA2G2AP14555 144 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 LRMPQ12912 555 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 CDH18Q13634 790 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 DCAF17Q5H9S7 520 aaPredicted RBP22.28■■□□□ 1.16
PCMT1-201ENST00000367378 MS4A13Q5J8X5 152 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 TCERG1LQ5VWI1 586 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 APCDD1Q8J025 514 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 BAP1Q92560 729 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 PTPRN2Q92932 1015 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 RPL10LQ96L21 214 aaKnown RBP22.28■■□□□ 1.16
PCMT1-201ENST00000367378 ERVMER34-1Q9H9K5 563 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 TENM4Q6N022 2769 aa22.28■■□□□ 1.16
PCMT1-201ENST00000367378 MGAQ8IWI9 3026 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 CETN3O15182 167 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 LATO43561 262 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 CALCAP01258 141 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 CKMT2P17540 419 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 C5AR1P21730 350 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 DRD3P35462 400 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 STK19P49842 368 aaPredicted RBP22.27■■□□□ 1.16
PCMT1-201ENST00000367378 METAP1P53582 386 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 YWHAEP62258 255 aaKnown RBP22.27■■□□□ 1.16
PCMT1-201ENST00000367378 ECT2LQ008S8 904 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 DCAF6Q58WW2 860 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 SLC45A4Q5BKX6 768 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 ZNF843Q8N446 348 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 LSM14AQ8ND56 463 aaKnown RBP22.27■■□□□ 1.16
PCMT1-201ENST00000367378 FGF11Q92914 225 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 DDX50Q9BQ39 737 aaKnown RBP22.27■■□□□ 1.16
PCMT1-201ENST00000367378 ARHGAP20Q9P2F6 1191 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 XPO7Q9UIA9 1087 aaKnown RBP22.27■■□□□ 1.16
PCMT1-201ENST00000367378 KIAA1257Q9ULG3 409 aa22.27■■□□□ 1.16
PCMT1-201ENST00000367378 TBC1D3DA0A087WVF3 549 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 TBC1D3IA0A087WXS9 549 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 TBC1D3EA0A087X179 549 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 TBC1D3KA0A087X1G2 549 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 FAM237AA0A1B0GTK4 181 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 TYW5A2RUC4 315 aaKnown RBP22.26■■□□□ 1.15
PCMT1-201ENST00000367378 TBC1D3FA6NER0 549 aaPredicted RBP22.26■■□□□ 1.15
PCMT1-201ENST00000367378 TBC1D3LB9A6J9 549 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 RNF225M0QZC1 329 aaPredicted RBP22.26■■□□□ 1.15
PCMT1-201ENST00000367378 LUC7L3O95232 432 aaKnown RBP22.26■■□□□ 1.15
PCMT1-201ENST00000367378 ADH1BP00325 375 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 TBC1D3HP0C7X1 549 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 VAV1P15498 845 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 GLDCP23378 1020 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 NUMBP49757 651 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 INSM1Q01101 510 aaPredicted RBP22.26■■□□□ 1.15
PCMT1-201ENST00000367378 ILKQ13418 452 aa22.26■■□□□ 1.15
PCMT1-201ENST00000367378 TBC1D3GQ6DHY5 549 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms