RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 GPC2Q8N158 579 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 MFSD3Q96ES6 412 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 SNX27Q96L92 541 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 EBF3Q9H4W6 596 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 MROH8Q9H579 483 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 C20orf96Q9NUD7 363 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-202ENST00000367279 BFARQ9NZS9 450 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 SLC39A10Q9ULF5 831 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 A0A096LPK6 155 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 ARRB2P32121 409 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 TBL3Q12788 808 aaKnown RBP12.63□□□□□ -0.39
PTPN7-202ENST00000367279 CDC16Q13042 620 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 HFE2Q6ZVN8 426 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 SDCCAG8Q86SQ7 713 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-202ENST00000367279 OR6J1Q8NGC5 347 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 COG4Q9H9E3 785 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 IARS2Q9NSE4 1012 aaKnown RBP12.63□□□□□ -0.39
PTPN7-202ENST00000367279 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 FIS1Q9Y3D6 152 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 SNX10Q9Y5X0 201 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 BEST1O76090 585 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 GSRP00390 522 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 AOC1P19801 751 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 FAM91A1Q658Y4 838 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 TIFABQ6ZNK6 161 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 NT5DC4Q86YG4 428 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 RNF148Q8N7C7 305 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 TUBGCP5Q96RT8 1024 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 C16orf70Q9BSU1 422 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 TRIM4Q9C037 500 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 WDR55Q9H6Y2 383 aaPredicted RBP12.63□□□□□ -0.39
PTPN7-202ENST00000367279 S100A14Q9HCY8 104 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 VANGL2Q9ULK5 521 aa12.63□□□□□ -0.39
PTPN7-202ENST00000367279 NUP205Q92621 2012 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 FAM72CH0Y354 149 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 LYNP07948 512 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 GRK2P25098 689 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 HOXA11P31270 313 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 SPRP35270 261 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 ACADSBP45954 432 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 CCR10P46092 362 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 TPI1P60174 286 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 SLC25A52Q3SY17 297 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 SLC9B1Q4ZJI4 515 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 CMPK2Q5EBM0 449 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 FAM72AQ5TYM5 149 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 FAM72DQ6L9T8 149 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 TAPT1Q6NXT6 567 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 NOTUMQ6P988 496 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 FRMD7Q6ZUT3 714 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 KDELC2Q7Z4H8 507 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 UNC93AQ86WB7 457 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 FAM72BQ86X60 149 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 ACMSDQ8TDX5 336 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 KBTBD7Q8WVZ9 684 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 SREK1Q8WXA9 508 aaKnown RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 RNF34Q969K3 372 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 CMTM5Q96DZ9 223 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 SORT1Q99523 831 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 TASP1Q9H6P5 420 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 STAP1Q9ULZ2 295 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 UBQLN1Q9UMX0 589 aaKnown RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 TIMM13Q9Y5L4 95 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 HACD1B0YJ81 288 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 CPOXP36551 454 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 PAPOLAP51003 745 aaKnown RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 POU5F1BQ06416 359 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 OR52E8Q6IFG1 317 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 FSTL4Q6MZW2 842 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 TDRD5Q8NAT2 981 aaKnown RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 MARK4Q96L34 752 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 TSNARE1Q96NA8 513 aa12.62□□□□□ -0.39
PTPN7-202ENST00000367279 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.62□□□□□ -0.39
PTPN7-202ENST00000367279 PHGDHO43175 533 aaKnown RBP12.61□□□□□ -0.39
PTPN7-202ENST00000367279 FKBP6O75344 327 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 MLNP12872 115 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 RAG1P15918 1043 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 ERCC2P18074 760 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 NUDT2P50583 147 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 TKTL1P51854 596 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 TUBB3Q13509 450 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 ARHGAP17Q68EM7 881 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 STRADAQ7RTN6 431 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 DHDDSQ86SQ9 333 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 PPTC7Q8NI37 304 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 GDPD5Q8WTR4 605 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 EDEM1Q92611 657 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 OLFM3Q96PB7 478 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 LRRC40Q9H9A6 602 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 CHRAC1Q9NRG0 131 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 PIGVQ9NUD9 493 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 CDH22Q9UJ99 828 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 SMIM28A0A1B0GU29 152 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 CXCL11O14625 94 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 ALDH1A2O94788 518 aa12.61□□□□□ -0.39
PTPN7-202ENST00000367279 STAU1O95793 577 aaKnown RBP12.61□□□□□ -0.39
PTPN7-202ENST00000367279 PEX2P28328 305 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms