RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 EBF3Q9H4W6 596 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 ERVK-5Q9HDB9 667 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 ANAPC4Q9UJX5 808 aa5.07□□□□□ -1.6
RNU4-28P-201ENST00000364739 ACTL6BO94805 426 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 HEXIM1O94992 359 aaKnown RBP5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 CYP21A2P08686 494 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 SERPINF1P36955 418 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 TRIM14Q14142 442 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 BRD3Q15059 726 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 DLGAP5Q15398 846 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 PRTGQ2VWP7 1150 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 TRIM60Q495X7 471 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 LRRC24Q50LG9 513 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 C6orf10Q5SRN2 563 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 ATPAF1Q5TC12 328 aaPredicted RBP5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 RFX8Q6ZV50 586 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 GPSM1Q86YR5 675 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 CCDC117Q8IWD4 279 aaPredicted RBP5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 DDIASQ8IXT1 998 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 PAQR4Q8N4S7 273 aaPredicted RBP5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 MPLKIPQ8TAP9 179 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 TMEM174Q8WUU8 243 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 ASB5Q8WWX0 329 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 HTATIP2Q9BUP3 242 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 ELAC1Q9H777 363 aaKnown RBP5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 TXNRD2Q9NNW7 524 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 DECR2Q9NUI1 292 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 LIN7CQ9NUP9 197 aaKnown RBP5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 RCE1Q9Y256 329 aa5.06□□□□□ -1.6
RNU4-28P-201ENST00000364739 C3orf70A6NLC5 250 aaPredicted RBP5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 ACKR2O00590 384 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 LARGE1O95461 756 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 ITGA2BP08514 1039 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 HMGB1P09429 215 aaKnown RBP5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 RCAN1P53805 252 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 FOXG1P55316 489 aaPredicted RBP5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 ICA1Q05084 483 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 PPATQ06203 517 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 CHAF1AQ13111 956 aaPredicted RBP5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 RPS6KA2Q15349 733 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 GALNTL6Q49A17 601 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 C10orf76Q5T2E6 689 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 ASPHD1Q5U4P2 390 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 CCDC174Q6PII3 467 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 KLHL17Q6TDP4 642 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 LRIG3Q6UXM1 1119 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 CYB5R4Q7L1T6 521 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 RTL10Q7L3V2 364 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 SLC44A2Q8IWA5 706 aaPredicted RBP5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 SPICE1Q8N0Z3 855 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 ADPRHL1Q8NDY3 354 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 EID2BQ96D98 161 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 TMEM120AQ9BXJ8 343 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 HDHD5Q9BXW7 423 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 ARHGAP39Q9C0H5 1083 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 PABPC3Q9H361 631 aaKnown RBP5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 ZNF304Q9HCX3 659 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 SPAG4Q9NPE6 437 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 DACT1Q9NYF0 836 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 HERC5Q9UII4 1024 aaKnown RBP5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 NFU1Q9UMS0 254 aa5.05□□□□□ -1.6
RNU4-28P-201ENST00000364739 SYT5O00445 386 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 ZC3H11AO75152 810 aaKnown RBP eCLIP5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 SYF2O95926 243 aaKnown RBP5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 ALPLP05186 524 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 SNHG28P0DPA3 235 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 ALDH7A1P49419 539 aaKnown RBP5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 AP2B1P63010 937 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 ZBTB16Q05516 673 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 PTGR1Q14914 329 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 TWIST1Q15672 202 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 TUBB8Q3ZCM7 444 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 ZNF549Q6P9A3 640 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 TMEM88Q6PEY1 159 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 SYNE3Q6ZMZ3 975 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 TMEM200AQ86VY9 491 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 PELI3Q8N2H9 469 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 TMEM217Q8N7C4 229 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 FAM110DQ8TAY7 271 aaPredicted RBP5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 C3orf49Q96BT1 292 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 ZNF419Q96HQ0 510 aaPredicted RBP5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 RMDN3Q96TC7 470 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 PRDM8Q9NQV8 689 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 GRHPRQ9UBQ7 328 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 KCND3Q9UK17 655 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 TNFSF13BQ9Y275 285 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 EVPLQ92817 2033 aa5.04□□□□□ -1.6
RNU4-28P-201ENST00000364739 TCRBV7S3A2A0A539 114 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 FOXO6A8MYZ6 492 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 MSI1O43347 362 aaKnown RBP5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 NEURL1O76050 574 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 TOMM40O96008 361 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 CSTBP04080 98 aaKnown RBP5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 LYL1P12980 280 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 ADPRHP54922 357 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 PMPCAQ10713 525 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 PDCLQ13371 301 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 GALNT3Q14435 633 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 TIGD6Q17RP2 521 aa5.03□□□□□ -1.6
RNU4-28P-201ENST00000364739 CCDC38Q502W7 563 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms