RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 ATP2A3Q93084 1043 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 ADAD1Q96M93 576 aaKnown RBP4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 SORBS1Q9BX66 1292 aaKnown RBP4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 WDR12Q9GZL7 423 aaKnown RBP4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 ZNF700Q9H0M5 742 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 TXNRD2Q9NNW7 524 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 CNTN6Q9UQ52 1028 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 TNFSF13BQ9Y275 285 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 COPG1Q9Y678 874 aaKnown RBP4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 LMTK3Q96Q04 1460 aa4.56□□□□□ -1.68
RNU6-553P-201ENST00000364047 MBD3L5A6NJ08 208 aaPredicted RBP4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 MSI1O43347 362 aaKnown RBP4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 SKAP2O75563 359 aaPredicted RBP4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 ITGA2BP08514 1039 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 GYS1P13807 737 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBXAS1P24557 533 aaPredicted RBP4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 TKTP29401 623 aaKnown RBP4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 HTR6P50406 440 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 ZACNQ401N2 412 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 TRIM60Q495X7 471 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 ARL13AQ5H913 290 aaPredicted RBP4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 TTC39AQ5SRH9 613 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 HMBOX1Q6NT76 420 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 PELI3Q8N2H9 469 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 TMEM174Q8WUU8 243 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 RTKNQ9BST9 563 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 KATNAL1Q9BW62 490 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 SPAG4Q9NPE6 437 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 LIN7CQ9NUP9 197 aaKnown RBP4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 FBXO4Q9UKT5 387 aa4.55□□□□□ -1.68
RNU6-553P-201ENST00000364047 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 FOXO6A8MYZ6 492 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 MCIDASD6RGH6 385 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 SYT5O00445 386 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 PDIA3P30101 505 aaKnown RBP4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 HTR3AP46098 478 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 POLD2P49005 469 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 P2RX3P56373 397 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 PUM3Q15397 648 aaKnown RBP4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 ODF3L2Q3SX64 289 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 ASPHD1Q5U4P2 390 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 ERAP2Q6P179 960 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 NFRKBQ6P4R8 1299 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 RTL10Q7L3V2 364 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 ATG16L2Q8NAA4 619 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 IP6K1Q92551 441 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 LPAR1Q92633 364 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 EID2BQ96D98 161 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 ZNF419Q96HQ0 510 aaPredicted RBP4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 CRB3Q9BUF7 120 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 BRD8Q9H0E9 1235 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 TASP1Q9H6P5 420 aa4.54□□□□□ -1.68
RNU6-553P-201ENST00000364047 ABHD14A-ACY1A0A1B0GW23 586 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 AGAP5A6NIR3 686 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A8PA6NJQ4 464 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 EFCAB8A8MWE9 144 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 H0YGN5 161 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 ACTL6BO94805 426 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A13PP0C7W8 464 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 FAM90A24PP0C7X0 464 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 HOXB2P14652 356 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 STAT1P42224 750 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 THBS3P49746 956 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 RCAN1P53805 252 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 ADPRHP54922 357 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 GALNT1Q10472 559 aaPredicted RBP4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 PMPCAQ10713 525 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 TBRG1Q3YBR2 411 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 ALG10Q5BKT4 473 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 ALG10BQ5I7T1 473 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 RAB11FIP2Q7L804 512 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 ASB5Q8WWX0 329 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 MARK4Q96L34 752 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 CAMK1GQ96NX5 476 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 WDR26Q9H7D7 661 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 MRPL44Q9H9J2 332 aaKnown RBP4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 HERC5Q9UII4 1024 aaKnown RBP4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 DAPP1Q9UN19 280 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 LZTS1Q9Y250 596 aa4.53□□□□□ -1.68
RNU6-553P-201ENST00000364047 KCNJ18B7U540 433 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 ACKR2O00590 384 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 MDM4O15151 490 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 NEURL1O76050 574 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 CDC25AP30304 524 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 CCKARP32238 428 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 SERPINF1P36955 418 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 PCP4P48539 62 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 POLE2P56282 527 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 NANOS2P60321 138 aaKnown RBP4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 ICA1Q05084 483 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 BRD3Q15059 726 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 RPS6KA2Q15349 733 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 C1orf228Q6PIY5 440 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 KLHL17Q6TDP4 642 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 KDELC2Q7Z4H8 507 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 ANKS1BQ7Z6G8 1248 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 KLBQ86Z14 1044 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 SLC44A2Q8IWA5 706 aaPredicted RBP4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 LYZL4Q96KX0 146 aa4.52□□□□□ -1.69
RNU6-553P-201ENST00000364047 RMDN3Q96TC7 470 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms