RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 THOP1P52888 689 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 ALDH6A1Q02252 535 aaKnown RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 MIIPQ5JXC2 388 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 SPANXN3Q5MJ09 141 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 PDPK2PQ6A1A2 396 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 KIAA1324Q6UXG2 1013 aaKnown RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 DLK2Q6UY11 383 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 FBXO39Q8N4B4 442 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 MRPL45Q9BRJ2 306 aaKnown RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 RIPK2O43353 540 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 HPGDP15428 266 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 PSMB4P28070 264 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 CHKAP35790 457 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 PLOD1Q02809 727 aaPredicted RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 TBX2Q13207 712 aaPredicted RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 ITGA9Q13797 1035 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 RRP1BQ14684 758 aaKnown RBP18.95■□□□□ 0.62
CLIP2-202ENST00000361545 GRTP1Q5TC63 336 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 KDM7AQ6ZMT4 941 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 TUBGCP4Q9UGJ1 667 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 RAD54BQ9Y620 910 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 MTA2O94776 668 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 BAIAP3O94812 1187 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 OTOP2Q7RTS6 562 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 SLC22A9Q8IVM8 553 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 ZFP42Q96MM3 310 aa18.95■□□□□ 0.62
CLIP2-202ENST00000361545 A0A096LPK6 155 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 RAD51BO15315 384 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 SH3BGRLO75368 114 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 TOMM70O94826 608 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 MPOP05164 745 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 PTPN3P26045 913 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 ABCG1P45844 678 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 SERPINH1P50454 418 aaKnown RBP18.94■□□□□ 0.62
CLIP2-202ENST00000361545 PPP1R26Q5T8A7 1209 aaPredicted RBP18.94■□□□□ 0.62
CLIP2-202ENST00000361545 SLC9A9Q8IVB4 645 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 DIS3LQ8TF46 1054 aaKnown RBP18.94■□□□□ 0.62
CLIP2-202ENST00000361545 SEMA4DQ92854 862 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 EFCAB14O75071 495 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 TGM3Q08188 693 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 ZNF697Q5TEC3 545 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 MCOLN3Q8TDD5 553 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 HDAC7Q8WUI4 952 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 LRRN4Q8WUT4 740 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 KRT87PA6NCN2 255 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 PSMD12O00232 456 aaPredicted RBP18.94■□□□□ 0.62
CLIP2-202ENST00000361545 BTN3A1O00481 513 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 THRAP10827 490 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 ETS1P14921 441 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 ANXA11P50995 505 aaKnown RBP18.94■□□□□ 0.62
CLIP2-202ENST00000361545 RTP1P59025 263 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 ZBTB17Q13105 803 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 PRKAA1Q13131 559 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 XRCC4Q13426 336 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 MEA1Q16626 185 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 ARSHQ5FYA8 562 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 DAB2IPQ5VWQ8 1189 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 LNX1Q8TBB1 728 aaPredicted RBP18.94■□□□□ 0.62
CLIP2-202ENST00000361545 PPP1R10Q96QC0 940 aaKnown RBP18.94■□□□□ 0.62
CLIP2-202ENST00000361545 EFCAB1Q9HAE3 211 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 CDHR5Q9HBB8 845 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 NDOR1Q9UHB4 597 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 PSEN1P49768 467 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 BBS7Q8IWZ6 715 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 SOX13Q9UN79 622 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 FAM50BQ9Y247 325 aa18.94■□□□□ 0.62
CLIP2-202ENST00000361545 UBR1Q8IWV7 1749 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 KRT6AP02538 564 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 KRT6BP04259 564 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 SELPP16109 830 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 BMP6P22004 513 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 GRK2P25098 689 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 KRT6CP48668 564 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 ZNF135P52742 658 aaPredicted RBP18.93■□□□□ 0.62
CLIP2-202ENST00000361545 FUT2Q10981 343 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 TUSC3Q13454 348 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 LRP10Q7Z4F1 713 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 PPP1R16AQ96I34 528 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 CAMKK2Q96RR4 588 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 FUT8Q9BYC5 575 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 ZYG11BQ9C0D3 744 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 GANQ9H2C0 597 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 PARVBQ9HBI1 364 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 ATRNO75882 1429 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 TGFB1I1O43294 461 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 TLR5O60602 858 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 SNHG28P0DPA3 235 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 TNNI3P19429 210 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 PLK1P53350 603 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 SLC45A4Q5BKX6 768 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 FBXW10Q5XX13 1052 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 TTPALQ9BTX7 342 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 SH3BP4Q9P0V3 963 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 PADI3Q9ULW8 664 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 SNRPD1P62314 119 aaKnown RBP18.93■□□□□ 0.62
CLIP2-202ENST00000361545 CRADDP78560 199 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 DUSP4Q13115 394 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 C9orf57Q5W0N0 161 aa18.93■□□□□ 0.62
CLIP2-202ENST00000361545 FAM35AQ86V20 835 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms