RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 PYGBP11216 843 aa14.17□□□□□ -0.14
CTR9-201ENST00000361367 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
CTR9-201ENST00000361367 TFAP2BQ92481 460 aa14.17□□□□□ -0.14
CTR9-201ENST00000361367 HNRNPABQ99729 332 aaKnown RBP14.17□□□□□ -0.14
CTR9-201ENST00000361367 TM6SF2Q9BZW4 377 aa14.17□□□□□ -0.14
CTR9-201ENST00000361367 DPEP3Q9H4B8 488 aa14.17□□□□□ -0.14
CTR9-201ENST00000361367 RAB21Q9UL25 225 aa14.17□□□□□ -0.14
CTR9-201ENST00000361367 CHUKO15111 745 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 MSI1O43347 362 aaKnown RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 CCL5P13501 91 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 RPL22P35268 128 aaKnown RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 NDUFV1P49821 464 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 SPANXN3Q5MJ09 141 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 PDPK2PQ6A1A2 396 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 ZCCHC9Q8N567 271 aaKnown RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 MAB21L3Q8N8X9 362 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 LRRC39Q96DD0 335 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 LGMNQ99538 433 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 OSGEPL1Q9H4B0 414 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 UTP6Q9NYH9 597 aaKnown RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 GMIPQ9P107 970 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 COL2A1P02458 1487 aaPredicted RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 FSCN2O14926 492 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 ACRP10323 421 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 MZF1P28698 734 aaPredicted RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 SERPINH1P50454 418 aaKnown RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 JAM2P57087 298 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 DDX39BQ13838 428 aaKnown RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 KRT80Q6KB66 452 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 NDRG1Q92597 394 aaKnown RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 ASPSCR1Q9BZE9 553 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 LRRC19Q9H756 370 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 PCDH18Q9HCL0 1135 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 MRGBPQ9NV56 204 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 PCYOX1Q9UHG3 505 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 ZMYND8Q9ULU4 1186 aaPredicted RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 PAGE1O75459 146 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 ZNF7P17097 686 aaPredicted RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 NFKB1P19838 968 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 ARHGDIAP52565 204 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 SGCGQ13326 291 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 HIST2H2ACQ16777 129 aaPredicted RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 HIST2H2AA3Q6FI13 130 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 SLC26A9Q7LBE3 791 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 ZBED3Q96IU2 234 aaPredicted RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 BBS2Q9BXC9 721 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 OXCT2Q9BYC2 517 aaPredicted RBP14.16□□□□□ -0.14
CTR9-201ENST00000361367 MPP6Q9NZW5 540 aa14.16□□□□□ -0.14
CTR9-201ENST00000361367 GOLGA8TH3BQL2 631 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 CD86P42081 329 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 NOVP48745 357 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 ZNF697Q5TEC3 545 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 MON1BQ7L1V2 547 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 OOSP2Q86WS3 158 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 COG4Q9H9E3 785 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 GDF3Q9NR23 364 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.15□□□□□ -0.14
CTR9-201ENST00000361367 SYCE1LA8MT33 242 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 MAP3K13O43283 966 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 TYMPP19971 482 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 AIF1P55008 147 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 OVGP1Q12889 678 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 LRRC8EQ6NSJ5 796 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 FBXL19Q6PCT2 694 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 KDM7AQ6ZMT4 941 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 TDRD5Q8NAT2 981 aaKnown RBP14.15□□□□□ -0.14
CTR9-201ENST00000361367 OR52K1Q8NGK4 314 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 RSPH1Q8WYR4 309 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 SEC16BQ96JE7 1060 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 MRPL1Q9BYD6 325 aaKnown RBP14.15□□□□□ -0.14
CTR9-201ENST00000361367 ZDHHC6Q9H6R6 413 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 A8MX80 341 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 SKAP2O75563 359 aaPredicted RBP14.15□□□□□ -0.14
CTR9-201ENST00000361367 KLHL2O95198 593 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 LMNAP02545 664 aaKnown RBP14.15□□□□□ -0.14
CTR9-201ENST00000361367 LMO2P25791 158 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 SERPINB4P48594 390 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 GJA9P57773 515 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 SNRPD1P62314 119 aaKnown RBP14.15□□□□□ -0.14
CTR9-201ENST00000361367 LCA5Q86VQ0 697 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 ALLCQ8N6M5 410 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 FNIP1Q8TF40 1166 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 SEMA3CQ99985 751 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 C11orf49Q9H6J7 331 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 CHADO15335 359 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 ATG7O95352 703 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 ITGAVP06756 1048 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 ENO3P13929 434 aaPredicted RBP14.15□□□□□ -0.14
CTR9-201ENST00000361367 CPA3P15088 417 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 MSH3P20585 1137 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 PGM1P36871 562 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 OTOAQ7RTW8 1153 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 TMEM139Q8IV31 216 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 FAXDC2Q96IV6 333 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 TTYH3Q9C0H2 523 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 IL22Q9GZX6 179 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 TRIM45Q9H8W5 580 aaPredicted RBP14.15□□□□□ -0.14
CTR9-201ENST00000361367 RGS18Q9NS28 235 aa14.15□□□□□ -0.14
CTR9-201ENST00000361367 FAM107AO95990 144 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms