RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 PRCCQ92733 491 aaPredicted RBP21.56■■□□□ 1.04
MAP1LC3A-201ENST00000360668 P2RY11Q96G91 374 aa21.56■■□□□ 1.04
MAP1LC3A-201ENST00000360668 RNF38Q9H0F5 515 aa21.56■■□□□ 1.04
MAP1LC3A-201ENST00000360668 A0A0A0MRY4 1105 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 MTSS1O43312 755 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ACSL4O60488 711 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 OLFM2O95897 454 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 GABRR2P28476 465 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 GARSP41250 739 aaKnown RBP21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 SLC11A2P49281 568 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 GPM6BQ13491 265 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 AFMIDQ63HM1 303 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 NADSYN1Q6IA69 706 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CHSY1Q86X52 802 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CCDC110Q8TBZ0 833 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 SPATA13Q96N96 652 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 TMEM248Q9NWD8 314 aa21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 YBX2Q9Y2T7 364 aaKnown RBP21.55■■□□□ 1.04
MAP1LC3A-201ENST00000360668 DOCK4Q8N1I0 1966 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 GOLGA8KD6RF30 607 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 OPHN1O60890 802 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CLASP2O75122 1294 aaKnown RBP21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 STC2O76061 302 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 TACR2P21452 398 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CDC25CP30307 473 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 BASP1P80723 227 aaKnown RBP21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 C5orf22Q49AR2 442 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 GAREM2Q75VX8 874 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 RELL1Q8IUW5 271 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ARHGAP12Q8IWW6 846 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 UBLCP1Q8WVY7 318 aaPredicted RBP21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 MRPS31Q92665 395 aaKnown RBP21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 RUFY1Q96T51 708 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 RETREG1Q9H6L5 497 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 MPP6Q9NZW5 540 aa21.54■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CHADO15335 359 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 MBL2P11226 248 aaPredicted RBP21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 PFKLP17858 780 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 HOXA9P31269 272 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 MAGEA6P43360 314 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ANKRD20A2Q5SQ80 823 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ANKRD20A1Q5TYW2 823 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ANKRD20A3Q5VUR7 823 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ARHGEF18Q6ZSZ5 1173 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 TRMT10CQ7L0Y3 403 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CCDC25Q86WR0 208 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 LRRC49Q8IUZ0 686 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 HS6ST3Q8IZP7 471 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CELF6Q96J87 481 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 TSGA13Q96PP4 275 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 GCNAQ96QF7 691 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 PHACTR1Q9C0D0 580 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 PABPC3Q9H361 631 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 TRPC7Q9HCX4 862 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 MAN1C1Q9NR34 630 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ASAH2Q9NR71 780 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 RAB6BQ9NRW1 208 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 DENND4CQ5VZ89 1909 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 F5H5T6 163 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 RNF103O00237 685 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CCL16O15467 120 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 FGF19O95750 216 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CORO1AP31146 461 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 NDST2P52849 883 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 SMAD3P84022 425 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 WASHC5Q12768 1159 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 KCNJ11Q14654 390 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ANKRD22Q5VYY1 191 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CCDC13Q8IYE1 715 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 UMODL1-AS1Q8N2C9 162 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 SLC22A17Q8WUG5 538 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 IGSF8Q969P0 613 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ZFRQ96KR1 1074 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 RPRD1AQ96P16 312 aaPredicted RBP21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 ZIM3Q96PE6 472 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 GKN1Q9NS71 199 aa21.53■■□□□ 1.04
MAP1LC3A-201ENST00000360668 NUP205Q92621 2012 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 GOLGA6L7A0A1B0GV03 622 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 LATS1O95835 1130 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 HNRNPA1P09651 372 aaKnown RBP eCLIP21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CCNCP24863 283 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 FDFT1P37268 417 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 FAM133BQ5BKY9 247 aaKnown RBP21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 TXNDC8Q6A555 127 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 VAT1Q99536 393 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 CORO1BQ9BR76 489 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 NDFIP2Q9NV92 336 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 DPP7Q9UHL4 492 aa21.52■■□□□ 1.04
MAP1LC3A-201ENST00000360668 DFFAO00273 331 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 CNTN5O94779 1100 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 KLKB1P03952 638 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 HDCP19113 662 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 PBX2P40425 430 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 EPHA5P54756 1037 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 ALFQ53S48 1182 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 DENND1CQ8IV53 801 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 LGI2Q8N0V4 545 aa21.51■■□□□ 1.03
MAP1LC3A-201ENST00000360668 TAB3Q8N5C8 712 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms