RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 RALAP11233 206 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 LIG1P18858 919 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 PIP5KL1Q5T9C9 394 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 KIAA1161Q6NSJ0 714 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 BORAQ6PGQ7 559 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 USP53Q70EK8 1073 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 SLC22A18ASQ8N1D0 253 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 ZSCAN31Q96LW9 406 aaPredicted RBP6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 TMEM74Q96NL1 305 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 CUEDC2Q9H467 287 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 SMPD4Q9NXE4 827 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 SEPT10Q9P0V9 454 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 PLEKHB1Q9UF11 243 aaPredicted RBP6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 ERVW-1Q9UQF0 538 aa6.21□□□□□ -1.41
CDC42SE2-201ENST00000360515 FBN2P35556 2912 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 NPHP3-ACAD11A0A0J9YXS1 232 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 SPTY2D1-AS1A0A0U1RR47 76 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 PP2D1A8MPX8 630 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 RNASEH1O60930 286 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 SORBS2O94875 1100 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 ASS1P00966 412 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 TGM2P21980 687 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 CORO1AP31146 461 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 PSMC1P62191 440 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 YPEL5P62699 121 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 CHST9Q7L1S5 443 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 SLITRK4Q8IW52 837 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 ACBD4Q8NC06 268 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 HCAR2Q8TDS4 363 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 ERCC4Q92889 916 aaPredicted RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 KCNK16Q96T55 309 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 PRMT1Q99873 361 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 MIR1-1HGQ9H1L0 117 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 INTS6Q9UL03 887 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 SLC12A8A0AV02 714 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 PMM2O15305 246 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 BEST1O76090 585 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 VNN1O95497 513 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 CST3P01034 146 aaPredicted RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 TMEM191BP0C7N4 346 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 HARSP12081 509 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 ITGA3P26006 1051 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 CLCN6P51797 869 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 HNRNPKP61978 463 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 SERPINA13PQ6UXR4 307 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 GPRIN1Q7Z2K8 1008 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 GATAD2AQ86YP4 633 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 FAM213AQ9BRX8 229 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 TEX15Q9BXT5 2789 aa6.21□□□□□ -1.42
CDC42SE2-201ENST00000360515 A0A1W2PQH9 124 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 TMEM110-MUSTN1A8MSY1 372 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 B4E171 279 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 LMO7DNF2Z398 122 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 UGT1A5P35504 534 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 DCTP40126 519 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 TSPAN7P41732 249 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 WASP42768 502 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 RPIAP49247 311 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 SUOXP51687 545 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 CYP27A1Q02318 531 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 FZD2Q14332 565 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZACNQ401N2 412 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 C4orf17Q53FE4 359 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 APLFQ8IW19 511 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZNF548Q8NEK5 533 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 GLMNQ92990 594 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 SLC45A3Q96JT2 553 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 C8orf76Q96K31 380 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 DDX50Q9BQ39 737 aaKnown RBP6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 EFHD1Q9BUP0 239 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 MAGEF1Q9HAY2 307 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 FBXL12Q9NXK8 326 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 CFAP69A5D8W1 941 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 A6NNZ2 444 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 TISP43B9A030 160 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 CBX4O00257 560 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 TGFB1I1O43294 461 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 SIN3BO75182 1162 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 TNFRSF8P28908 595 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 GTF2H1P32780 548 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 RABIFP47224 123 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 NFATC3Q12968 1075 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 FAM46CQ5VWP2 391 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 C1QL3Q5VWW1 255 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 TTC30AQ86WT1 665 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZSCAN1Q8NBB4 408 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 HJURPQ8NCD3 748 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 ZSWIM2Q8NEG5 633 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 HTR3CQ8WXA8 447 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 CALML4Q96GE6 196 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 PDE11AQ9HCR9 933 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 HS3ST2Q9Y278 367 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 PCDHGA6Q9Y5G7 932 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 ANKRD17O75179 2603 aaKnown RBP6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 ACACAQ13085 2346 aa6.2□□□□□ -1.42
CDC42SE2-201ENST00000360515 D6RAR5 112 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 AP1G2O75843 785 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 FSBPO95073 299 aa6.19□□□□□ -1.42
CDC42SE2-201ENST00000360515 MAP3K6O95382 1288 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms